Protein Overview: Srp54-PA

General Information:
Name(s) found:	Srp54-PA / FBpp0079471 [FlyBase]
Description(s) found: Found 22 descriptions. SHOW ALL	The gene Srp54 is referred to in FlyBase by the symbol Dmel\Srp54 (CG4602, FBgn0024285). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:9912907..9915044. It has the cytological map location 30E4. There is experimental evidence that it has the molecular function</span>: poly-pyrimidine tract binding. There is experimental evidence that it is involved in the biological process</span>: regulation of alternative nuclear mRNA splicing, via spliceosome. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
Organism:	Drosophila melanogaster
Length:	513 amino acids
Gene Ontology:
Cellular Component:	nucleus [IC] catalytic step 2 spliceosome [IDA] precatalytic spliceosome [IDA] spliceosomal complex [ISS][NAS]
Biological Process:	regulation of alternative nuclear mRNA splicing, via spliceosome [IMP] mRNA splice site selection [ISS] nuclear mRNA splicing, via spliceosome [IC][ISS][NAS]
Molecular Function:	nucleotide binding [IEA] poly-pyrimidine tract binding [IDA] mRNA binding [ISS][NAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGNTPRVI QVTNIAPQAT KDQMQTLFGN IGKIEEIRLY PTIRDVSCPV QSRICYVKYT  60
   61 DTTSVPVAQH LTNTVFIDRA LIVIPVLAIP EEYRALEMLK NGTIVPGLQK PDSKLPPEVI 120
  121 NRIEGQLPQQ VIKTYDPKLV EFNLPEYPAL PSFYDARKIE EIRRTIIVCD VKNEWRLDDL 180
  181 MECFQRAGEV KYARWAEKDN KTYCMIEFCE QTSIIHALRM QGQEFKGGHL SVYHSTYSIT 240
  241 KPEAKSNEAA QAEIEEAMTI VKEAQSMISA AIDPVIGMLA KDKRRRSRSR SRSRDRRTSR 300
  301 SRSHRSTSRR RSRRSGSRER RSVSRSRRSR SRGKHSSRSR SKRSRSRHRR SSSRSRRSRS 360
  361 RGGKHSRSSR SRGKRSRSRH RRSTSRSRSS RSHGTGGGGS GNGKRSRSRE RSKKSHRSEK 420
  421 HSSRSPRSRS KRSSPSPPPA TGSKSRSSRS KDPVIVSAKS SRRRDRSRTP ETRKLKSISE 480
  481 DTEVKSSRSS ADSKSRKSVS VEKSDNMDIS NSP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: Srp54-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: