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Protein Overview: Rtnl1-PA

General Information:
Name(s) found: Rtnl1-PA / FBpp0078678 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene Rtnl1 is referred to in FlyBase by the symbol Dmel\Rtnl1 (CG33113, FBgn0053113). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:4993641..5009744. It has the cytological map location 25B9-25C1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior; olfactory behavior. 26 alleles are reported. No phenotypic data is available. It has 11 annotated transcripts and 11 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 222 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    cytoplasm [IDA]
    endoplasmic reticulum [IEA]
    Biological Process: olfactory behavior [IMP]
    inter-male aggressive behavior [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGSKRYSR NNSNGNFQPL PERGPVESLI YWRDVKKSGI VFGAGLITLA AISSFSVISV  60
   61 FAYLSLLTLF GTVAFRIYKS VTQAVQKTNE GHPFKDYLEL DLTLSHEKVQ NIAGVAVAHI 120
  121 NGFISELRRL FLVEDIIDSI KFGVILWVFT YVGAWFNGMT LVILAFVSLF TLPKVYENNK 180
  181 QSIDTHLDLV RSKLTEITDK IRVAIPIGNK KPEAAAESEK DK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 15.522879 No description for 2g31A was found.
    2 View Details [143..222] MSA 3.120993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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