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Protein Overview: CG10908-PA, FBpp...

General Information:
Name(s) found: FBpp0306799 [FlyBase]
CG10908-PA / FBpp0077489 [FlyBase]
Description(s) found:
Found 30 descriptions.
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  • type=protein; loc=2L:join(1974236..1974480,1974564..1974818,1974881..1974991,1975061..1975187); ID=FBpp0306799; name=Der-1-PB; parent=FBgn0031376,FBtr0334758; dbxref=FlyBase:FBpp0306799,FlyBase_Annotation_IDs:CG10908-PB,REFSEQ:NP_001259892,GB_protein:AGB92429; MD5=49bbfee456d0c191ebcd18e366de17de; length=245; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10908 (CG10908, FBgn0031376). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:1974145..1975422. It has the cytological map location 22B8. Based on sequence similarity, it is predicted to have molecular function</span>: peptidase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: ER-associated protein catabolic process; misfolded or incompletely synthesized protein catabolic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISS]
    Biological Process: misfolded or incompletely synthesized protein catabolic process [ISS]
    ER-associated protein catabolic process [ISS]
    Molecular Function: peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAGVWYRSL PRFTRYWLTA TVVLSMLCRF DVIPLHWLHL DRSAVFSKLQ LWRCMTSLFV  60
   61 FPISSNTAFH FLINCFFIVQ YSSKLEKDQY SRSPADYLYL LIVSAVLANI GGMIFNVYFL 120
  121 MDTLVLAITY IWCQLNKDVT VSFWFGTRFK AMYLPWVLAA FEFIFHFSLA SLVGIFVGHV 180
  181 YYFFKFQYSQ DLGGTPLLET PQFLKRLVPD VSGGFGGFGL PPESRAPPRQ ATESPWGRGM 240
  241 TLGRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 6.0 No description for 2nr9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.545407789079971 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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