YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG10908-PA, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAGVWYRSL PRFTRYWLTA TVVLSMLCRF DVIPLHWLHL DRSAVFSKLQ LWRCMTSLFV  60
   61 FPISSNTAFH FLINCFFIVQ YSSKLEKDQY SRSPADYLYL LIVSAVLANI GGMIFNVYFL 120
  121 MDTLVLAITY IWCQLNKDVT VSFWFGTRFK AMYLPWVLAA FEFIFHFSLA SLVGIFVGHV 180
  181 YYFFKFQYSQ DLGGTPLLET PQFLKRLVPD VSGGFGGFGL PPESRAPPRQ ATESPWGRGM 240
  241 TLGRN

Type	Start	End	Confidence
Cytoplasmic	1	15	0.87
Transmembrane Helix	16	37	0.90
Non-Cytoplasmic	38	57	0.84
Transmembrane Helix	58	78	0.91
Cytoplasmic	79	96	0.84
Transmembrane Helix	97	120	0.90
Non-Cytoplasmic	121	162	0.70
Transmembrane Helix	163	183	0.90
Cytoplasmic	184	245	0.76