Protein Overview: WHRN_RAT

General Information:
Name(s) found:	WHRN_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|56404686\|sp\|Q810W9.1\|WHRN_RAT RecName: Full=Whirlin; AltName: Full=CASK-interacting protein CIP98 [NCBI NR] gi\|30842794\|ref\|NP_851602.1\| CASK-interacting protein CIP98 [Rattus norvegicus] [NCBI NR] gi\|29373053\|gb\|AAO72534.1\| CASK-interacting protein CIP98 [Rattus norvegicus] [NCBI NR] Whirlin OS=Rattus norvegicus GN=Dfnb31 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):5-85585535 CASK-interacting protein CIP98 [hmr_yeast5_DM3-1_pombe.fasta] CASK-interacting protein CIP98 [HMR_022704-rand.fasta] CASK-interacting protein CIP98 [Rattus norvegicus]gi\|29373053\|gb\|AAO72534.1\| CASK-interacting protein CIP98 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Whirlin [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Whirlin (CASK-interacting protein CIP98) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] CASK-interacting protein CIP98 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 CASK-INTERACTING PROTEIN CIP98 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Cip98 Whirlin [rat-ipi-250309-contam.fasta] Whirlin OS=Rattus norvegicus GN=Whrn [011711_HMR.fasta] Whirlin OS=Rattus norvegicus GN=Whrn PE=1 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	920 amino acids
Gene Ontology:
Cellular Component:	growth cone [IEA] photoreceptor connecting cilium [IDA] dendrite [IDA] cytoplasm [UNKNOWN][IEA] cilium [UNKNOWN][IEA] stereocilia ankle link complex [UNKNOWN][IEA] stereocilium [IDA][ISS] neuronal cell body [IDA] photoreceptor inner segment [IDA] actin filament [UNKNOWN][IEA] neuron projection [IPI] axon [IDA]
Biological Process:	sensory perception of sound [UNKNOWN][IEA] retina homeostasis [UNKNOWN][IEA] inner ear receptor stereocilium organization [ISS] synaptic transmission [IPI] sensory perception of light stimulus [UNKNOWN]
Molecular Function:	protein domain specific binding [IPI] protein binding [UNKNOWN][IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAQLDGLSV SSSSTGSLGS AAAAAGGGGG AGLRLLSANV RQLHQALTAL LSEPEREQFT  60
   61 HCLNAYHARR NVFDLVRTLR VLLDSPVKRR LLPMLRLVIP RSDQLLFDQY TAEGLYLPAT 120
  121 TPYRQPAWAA PDGAGPGEVR LVSLRRAKAH EGLGFSIRGG SEHGVGIYVS LVEPGSLAEK 180
  181 EGLRVGDQIL RVNDKSLARV THAEAVKALK GSKKLVLSVY SAGRIPGGYV TNHIYTWVDP 240
  241 QGRSTSPPSS LPHGSTLRQH EDDRRSALHL LQSGDEKKVN LVLGDGRSLG LTIRGGAEYG 300
  301 LGIYITGVDP GSEAESSGLK VGDQILEVNG RSFLSILHDE AVKLLKSSRH LILTVKDVGR 360
  361 LPHARTTVDQ TKWIASSRIG ESITNSAGFP GDLTEEGTNK PGFYKGPAGS QVTLSSLGNQ 420
  421 TRALLDDQAR HLLTEQERAT MMYYLDQYRG GTISVEALVM ALFELLNTHA KFSLLSEVRG 480
  481 IISPQDLDRF DHLVLRREIE SMKARQPPGP GVGDTYSMVS YSDTGSSTGS HGTSTTVSSA 540
  541 RERLLWLIDL MENTLDLEGT CETTQGSTNA LPDVSVDDVR SPSEDLPGIK PPPPPPPLAQ 600
  601 GHDRLLGQTR KPVREDSAPL SSAAHSGIVF SAPRNRSPPP PPGIAPTPTP GPSSARDSPS 660
  661 SPIYASISHA NPSSRKPLDT HLALVNQHPI GPFPRVQSPP HLKSPPAEAP GAGACLPPPS 720
  721 PSEHADAMGA NQHFVLVEVH RPDSEPDVNE VRALPQTRTA STLSQLSDSG QTLSEDSGVD 780
  781 AGETEASTSG RGRQTANTKN KNGKELPQTE RTTEGANKPP GLLEPTSTLI RVRKSAATLG 840
  841 IAIEGGANTR QPLPRIVTIQ RGGSAHNCGQ LKVGHVILEV NGQTLRGKEH REAARVIAEA 900
  901 FKTKERDYID FLVTEFNVML

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: WHRN_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: