YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FABP9_RAT

General Information:
Name(s) found: FABP9_RAT [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|538269|gb|AAA67873.1| 15 kDa perforatorial protein PERF 15 [Rattus norvegicus] [NCBI NR]
  • gi|469052|gb|AAA68627.1| testis lipid binding protein [NCBI NR]
  • pir||I52524 testis lipid binding protein - rat [NCBI NR]
  • gi|1729979|sp|P55054.1|FABP9_RAT RecName: Full=Fatty acid-binding protein 9; AltName: Full=Testis lipid-binding protein; Short=TLBP; AltName: Full=15 kDa perforatorial protein; AltName: Full=PERF 15 [NCBI NR]
  • gi|1519523|gb|AAB07538.1| PERF15 protein [Rattus norvegicus] [NCBI NR]
  • gi|149048454|gb|EDM00995.1| fatty acid binding protein 9, testis [Rattus norvegicus] [NCBI NR]
  • gi|12408304|ref|NP_074045.1| fatty acid binding protein 9, testis [Rattus norvegicus] [NCBI NR]
  • Testis lipid-binding protein - Rattus norvegicus (Rat) [Swiss-Prot]
  • Fatty acid-binding protein 9 OS=Rattus norvegicus GN=Fabp9 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):2-86888535 Testis lipid binding protein [hmr_yeast5_DM3-1_pombe.fasta]
  • testis lipid binding protein [HMR_022704-rand.fasta]
  • testis lipid binding protein [Rattus norvegicus]gi|1729979|sp|P55054|TLBP_RAT Testis lipid binding protein (TLBP) (15 kDa perforatorial protein) (PERF 15)gi|2119434|pir||I52524 testis lipid binding protein - ratgi|1519523|gb|AAB07538.1| PERF15 protein [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Testis lipid-binding protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • (NM_022854) testis lipid binding protein [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Tax_Id=10116 Testis lipid binding protein [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta]
  • Fatty acid-binding protein 9 (Testis lipid-binding protein) (TLBP) (15 kDa perforatorial protein) (PERF 15) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • fatty acid binding protein 9, testis [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PERF15 protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • 15 kDa perforatorial protein PERF 15 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 TESTIS LIPID BINDING PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Testis lipid-binding protein (TLBP) (15 kDa perforatorial protein) (PERF 15) [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Fabp9 Fatty acid-binding protein 9 [rat-ipi-250309-contam.fasta]
  • Fatty acid-binding protein 9 OS=Rattus norvegicus GN=Fabp9 [011711_HMR.fasta]
  • Fatty acid-binding protein 9 OS=Rattus norvegicus GN=Fabp9 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 132 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    acrosomal vesicle [IDA]
    Biological Process: acrosome assembly [IEP]
    transport [IEA]
    Molecular Function: lipid binding [IEA]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEPFLGTWK LVSSENFENY VRELGVECEP RKVACLIKPS VSISFNGERM DIQAGSACRN  60
   61 TEISFKLGEE FEETTADNRK VKSLITFEGG SMIQIQRWLG KQTTIKRRIV DGRMVVECTM 120
  121 NNVVSTRTYE RV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 41.39794 No description for 2qm9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • long-chain fatty acid transporter activity
    		•  5.31242454679135 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  5.05947161650978 bayes_pls_golite062009
  • lipid transporter activity
    		•  4.30505384117861 bayes_pls_golite062009
  • retinoid binding
    		•  3.86745158299736 bayes_pls_golite062009
  • isoprenoid binding
    		•  3.80802424204178 bayes_pls_golite062009
  • lysophospholipid transporter activity
    		•  3.53484598441971 bayes_pls_golite062009
  • retinol binding
    		•  3.41359399354212 bayes_pls_golite062009
  • binding
    		•  2.93830472620404 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.27413749831465 bayes_pls_golite062009
  • transporter activity
    		•  2.15627660314839 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.45696778890481 bayes_pls_golite062009
  • protein binding
    		•  1.23450129884619 bayes_pls_golite062009
  • prostaglandin-D synthase activity
    		•  1.18764036773412 bayes_pls_golite062009
  • lipid binding
    		•  1.0002255159651 bayes_pls_golite062009
  • retinol transporter activity
    		•  0.811095267558536 bayes_pls_golite062009
  • fatty acid binding
    		•  0.761923641769607 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.670647472301401 bayes_pls_golite062009
  • retinoic acid binding
    		•  0.539496110498594 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.50851501669551 bayes_pls_golite062009
  • bile acid binding
    		•  0.37501307074598 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle