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Protein Overview: FABP5_RAT

General Information:
Name(s) found: FABP5_RAT [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Fatty acid-binding protein, epidermal OS=Rattus norvegicus GN=Fabp5 PE=1 SV=3 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 135 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: lipid metabolic process [UNKNOWN]
    response to wounding [IEP]
    glucose transport [UNKNOWN]
    glucose metabolic process [UNKNOWN]
    phosphatidylcholine biosynthetic process [UNKNOWN]
    transport [IEA]
    Molecular Function: fatty acid binding [IDA]
    protein binding [UNKNOWN]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKDLEGK WRLVESHGFE DYMKELGVGL ALRKMGAMAK PDCIITLDGN NLTVKTESTV  60
   61 KTTVFSCTLG EKFDETTADG RKTETVCTFT DGALVQHQKW EGKESTITRK LKDGKMVVEC 120
  121 VMNNAICTRV YEKVQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 40.0 HUMAN RECOMBINANT EPIDERMAL FATTY ACID BINDING PROTEIN

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • long-chain fatty acid transporter activity
    		•  4.03130183716737 bayes_pls_golite062009
  • retinoid binding
    		•  3.86745158299736 bayes_pls_golite062009
  • isoprenoid binding
    		•  3.80802424204178 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  3.78208104687342 bayes_pls_golite062009
  • retinol binding
    		•  3.41359399354212 bayes_pls_golite062009
  • binding
    		•  2.93830472620404 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.27413749831465 bayes_pls_golite062009
  • lipid transporter activity
    		•  1.7304520084656 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.45696778890481 bayes_pls_golite062009
  • protein binding
    		•  1.23450129884619 bayes_pls_golite062009
  • prostaglandin-D synthase activity
    		•  1.18764036773412 bayes_pls_golite062009
  • lipid binding
    		•  1.0002255159651 bayes_pls_golite062009
  • retinol transporter activity
    		•  0.811095267558536 bayes_pls_golite062009
  • fatty acid binding
    		•  0.761923641769607 bayes_pls_golite062009
  • retinoic acid binding
    		•  0.539496110498594 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.50851501669551 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle