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Protein Overview: STMN1_RAT

General Information:
Name(s) found: STMN1_RAT [Swiss-Prot]
Description(s) found:
Found 26 descriptions.
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  • Stathmin OS=Rattus norvegicus GN=Stmn1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [UNKNOWN][IEA]
    intracellular [UNKNOWN]
    microtubule [IEA]
    Biological Process: intracellular signaling pathway [TAS]
    multicellular organismal development [IEA]
    mitotic spindle organization [UNKNOWN]
    axonogenesis [UNKNOWN]
    nervous system development [IEA]
    cell differentiation [IEA]
    positive regulation of cellular component movement [UNKNOWN]
    response to virus [UNKNOWN]
    microtubule depolymerization [UNKNOWN][TAS]
    negative regulation of microtubule polymerization [UNKNOWN]
    Molecular Function: tubulin binding [IPI]
    protein binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSDIQVKE LEKRASGQAF ELILSPRSKE SVPEFPLSPP KKKDLSLEEI QKKLEAAEER  60
   61 RKSHEAEVLK QLAEKREHEK EVLQKAIEEN NNFSKMAEEK LTHKMEANKE NREAQMAAKL 120
  121 ERLREKDKHV EEVRKNKESK DPADETEAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 24.39794 TUBULIN-PODOPHYLLOTOXIN: STATHMIN-LIKE DOMAIN COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tubulin binding
    		•  3.65496915008945 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.89666448608274 bayes_pls_golite062009
  • microtubule binding
    		•  2.64117962157109 bayes_pls_golite062009
  • protein binding
    		•  2.51615225301602 bayes_pls_golite062009
  • binding
    		•  2.01491607652085 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle