General Information: |
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Name(s) found: |
CTCF_RAT
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Rattus norvegicus |
Length: | 737 amino acids |
Gene Ontology: |
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Cellular Component: |
condensed chromosome
[UNKNOWN][IEA]
nucleus [UNKNOWN][IEA] chromosome, centromeric region [UNKNOWN][IEA] nucleolus [UNKNOWN][IEA] intracellular [IEA] nucleoplasm [UNKNOWN][IEA] |
Biological Process: |
chromatin modification
[IEA]
regulation of histone methylation [IEA] regulation of histone acetylation [IEA] regulation of transcription, DNA-dependent [UNKNOWN] chromosome segregation [IEA] regulation of transcription [IEA] regulation of gene expression, epigenetic [UNKNOWN] negative regulation of gene expression [IEA] regulation of gene expression by genetic imprinting [UNKNOWN][IEA] DNA methylation [UNKNOWN] negative regulation of transcription, DNA-dependent [UNKNOWN][IEA] positive regulation of transcription, DNA-dependent [UNKNOWN][IEA] positive regulation of gene expression [UNKNOWN][IEA] regulation of molecular function, epigenetic [UNKNOWN][IEA] nucleosome positioning [UNKNOWN][IEA] maintenance of DNA methylation [UNKNOWN][IEA] |
Molecular Function: |
DNA binding
[UNKNOWN][TAS]
transcription factor activity [UNKNOWN][TAS] zinc ion binding [IEA] protein binding [UNKNOWN][IEA] metal ion binding [IEA] chromatin insulator sequence binding [UNKNOWN][IEA] sequence-specific DNA binding [UNKNOWN] promoter binding [UNKNOWN][IEA] transcription activator activity [UNKNOWN][IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MEGEAVEAIV EESETFIKGK ERKTYQRRRE GGQEEDACHL PQNQTDGGEV VQDVNSSVQM 60 61 VMMEQLDPTL LQMKTEVMEG TVAPEAEAAV DDTQIITLQV VNMEEQPINI GELQLVQVPV 120 121 PVTVPVATTS VEELQGAYEN EVSKEGLAES EPMICHTLPL PEGFQVVKVG ANGEVETLEQ 180 181 GELPPQEDPS WQKDPDYQPP AKKTKKTKKS KLRYTEEGKD VDVSVYDFEE EQQEGLLSEV 240 241 NAEKVVGNMK PPKPTKIKKK GVKKTFQCEL CSYTCPRRSN LDRHMKSHTD ERPHKCHLCG 300 301 RAFRTVTLLR NHLNTHTGTR PHKCPDCDMA FVTSGELVRH RRYKHTHEKP FKCSMCDYAS 360 361 VEVSKLKRHI RSHTGERPFQ CSLCSYASRD TYKLKRHMRT HSGEKPYECY ICHARFTQSG 420 421 TMKMHILQKH TENVAKFHCP HCDTVIARKS DLGVHLRKQH SYIEQGKKCR YCDAVFHERY 480 481 ALIQHQKSHK NEKRFKCDQC DYACRQERHM IMHKRTHTGE KPYACSHCDK TFRQKQLLDM 540 541 HFKRYHDPNF VPAAFVCSKC GKTFTRRNTM ARHADNCAGP DGVEGENGGE TKKSKRGRKR 600 601 KMRSKKEDSS DSENAEPDLD DNEEEEEPAV EIEPEPEPQP QPQPQPQPQP VAPAPPPAKK 660 661 RRGRPPGRTN QPKQNQPTAI IQVEDQNTGA IENIIVEVKK EPDAEPAEGE EEEAQAAPAD 720 721 APNGDLTPEM ILSMMDR |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)