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Protein Overview: RPC9_RAT

General Information:
Name(s) found: RPC9_RAT [Swiss-Prot]
Description(s) found:
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  • gi|37590773|gb|AAH59117.1| Calcitonin gene-related peptide-receptor component protein [Rattus norvegicus] [NCBI NR]
  • gi|20532031|sp|Q8VHM6.1|RPC9_RAT RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-receptor component protein; Short=CGRP-R [NCBI NR]
  • gi|19526763|ref|NP_446122.1| calcitonin gene-related peptide-receptor component protein [Rattus norvegicus] [NCBI NR]
  • gi|18182825|gb|AAL57492.2|AF440799_1 CGRP-receptor component protein [Rattus norvegicus] [NCBI NR]
  • gi|149063147|gb|EDM13470.1| calcitonin gene-related peptide-receptor component protein, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • DNA-directed RNA polymerase III subunit RPC9 OS=Rattus norvegicus GN=Crcp PE=2 SV=1 [Swiss-Prot]
  • Calcitonin gene-related peptide-receptor component protein (CGRP-receptor component protein) (CGRP-RCP) (CGRPRCP) - Rattus norvegicus (Rat) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):12-27543791 Calcitonin gene-related peptide-receptor component protein [hmr_yeast5_DM3-1_pombe.fasta]
  • calcitonin gene-related peptide-receptor component protein [HMR_022704-rand.fasta]
  • calcitonin gene-related peptide-receptor component protein [Rattus norvegicus]gi|37590773|gb|AAH59117.1| Calcitonin gene-related peptide-receptor component protein [Rattus norvegicus]gi|18182825|gb|AAL57492.2| CGRP-receptor component protein [Rattus nor [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Calcitonin gene-related peptide-receptor component protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • (NM_053670) calcitonin gene-related peptide-receptor component protein [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • calcitonin gene-related peptide-receptor component protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • DNA-directed RNA polymerase III subunit RPC9 (RNA polymerase III subunit C9) (Calcitonin gene-related peptide-receptor component protein) (CGRP-receptor component protein) (CGRP-RCP) (CGRPRCP) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • calcitonin gene-related peptide-receptor component protein, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Calcitonin gene-related peptide-receptor component protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • CGRP-receptor component protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Calcitonin gene-related peptide-receptor component protein (CGRP-receptor component protein) (CGRP-RCP) (CGRPRCP) [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Crcp DNA-directed RNA polymerase III subunit RPC9 [rat-ipi-250309-contam.fasta]
  • DNA-directed RNA polymerase III subunit RPC9 OS=Rattus norvegicus GN=Crcp [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 148 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    DNA polymerase III complex [UNKNOWN][ISS]
    acrosomal vesicle [UNKNOWN][IEA]
    plasma membrane [IEA]
    Biological Process: inflammatory response [IDA]
    neuropeptide signaling pathway [UNKNOWN][IEA]
    transcription [IEA]
    transcription from RNA polymerase III promoter [UNKNOWN][ISS]
    innate immune response [IEA]
    response to virus [IEA]
    cellular metabolic process [IEA]
    response to stress [IEP]
    Molecular Function: nucleotide binding [IEA]
    DNA-directed RNA polymerase activity [UNKNOWN][ISS]
    calcitonin gene-related polypeptide receptor activity [UNKNOWN][IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKDANAAL LSNYEVFQLL TDLKEQRKES GKNKHSAGQQ NLNAITYETL KYISKTPCKN  60
   61 QSPAIVQEFL TAMKSHKLTK AEKLQLLNHR PMTAVEIQLM VEESEERLTE EQIEALLHTV 120
  121 TSILPAGPED EQSKSTSNDA AMEEEEPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 27.045757 Subunits Rpb4 and Rpb7 of human RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle