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Protein Overview: RPC9_RAT

General Information:
Name(s) found: RPC9_RAT [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • DNA-directed RNA polymerase III subunit RPC9 OS=Rattus norvegicus GN=Crcp PE=2 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 148 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    DNA polymerase III complex [UNKNOWN][ISS]
    acrosomal vesicle [UNKNOWN][IEA]
    plasma membrane [IEA]
    Biological Process: inflammatory response [IDA]
    neuropeptide signaling pathway [UNKNOWN][IEA]
    transcription [IEA]
    transcription from RNA polymerase III promoter [UNKNOWN][ISS]
    innate immune response [IEA]
    response to virus [IEA]
    cellular metabolic process [IEA]
    response to stress [IEP]
    Molecular Function: nucleotide binding [IEA]
    DNA-directed RNA polymerase activity [UNKNOWN][ISS]
    calcitonin gene-related polypeptide receptor activity [UNKNOWN][IEA]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKDANAAL LSNYEVFQLL TDLKEQRKES GKNKHSAGQQ NLNAITYETL KYISKTPCKN  60
   61 QSPAIVQEFL TAMKSHKLTK AEKLQLLNHR PMTAVEIQLM VEESEERLTE EQIEALLHTV 120
  121 TSILPAGPED EQSKSTSNDA AMEEEEPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 27.045757 Subunits Rpb4 and Rpb7 of human RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle