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Protein Overview: APTX_RAT

General Information:
Name(s) found: APTX_RAT [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Aprataxin OS=Rattus norvegicus GN=Aptx PE=2 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 329 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    nucleolus [UNKNOWN][IEA]
    chromatin [UNKNOWN][IEA]
    cellular_component [ND]
    intracellular [IEA]
    nucleoplasm [UNKNOWN][IEA]
    Biological Process: single strand break repair [UNKNOWN][IEA]
    biological_process [ND]
    regulation of protein stability [UNKNOWN][IEA]
    DNA ligation [UNKNOWN][IEA]
    response to hydrogen peroxide [UNKNOWN][IEA]
    response to DNA damage stimulus [UNKNOWN]
    double-strand break repair [UNKNOWN]
    Molecular Function: zinc ion binding [IEA]
    double-stranded DNA binding [UNKNOWN][IEA]
    polynucleotide 3'-phosphatase activity [UNKNOWN]
    chromatin binding [UNKNOWN][IEA]
    damaged DNA binding [UNKNOWN][IEA]
    molecular_function [ND]
    protein binding [UNKNOWN]
    phosphoglycolate phosphatase activity [UNKNOWN][IEA]
    double-stranded RNA binding [UNKNOWN][IEA]
    catalytic activity [IEA]
    metal ion binding [IEA]
    protein N-terminus binding [UNKNOWN][IEA]
    hydrolase activity [IEA]
    DNA 5'-adenosine monophosphate hydrolase activity [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVCWLVRQD CWHQRIKLPH LEAVVIGRSP ETKITDKKCS RQQVQLKAEC NKRYVNVKQM  60
   61 GVNPTSIDEV VIGKDREMKL LPGQVLHMVN ELYPYMVEFE EVAESPNVTQ RKRKRPDCDS 120
  121 QEMEAEAGAS PSQCSVSPKT GKHGAAKEES LGHWSQGLKI SMKDPKMQVY KDDQVVVIKD 180
  181 KYPKARHHWL VLPWASISSL KVVTSEHLEL LKHMHAVGEK VIADFTGSSK LRFRLGYHAI 240
  241 PSMSHVHLHV ISQDFDSPCL KNKKHWNSFN TEYFLESQAV IKMVQEAGRV TVKDGTCELL 300
  301 KLPLRCHECQ QLLPSIPQLK EHLRKHWGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle