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Protein Overview: SNP25_RAT

General Information:
Name(s) found: SNP25_RAT [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • Synaptosomal-associated protein 25 OS=Rattus norvegicus GN=Snap25 PE=1 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: synaptosome [IEA]
    voltage-gated potassium channel complex [IPI]
    synapse [IEA]
    neuron projection [IDA]
    plasma membrane [IEA]
    growth cone [IDA]
    trans-Golgi network [IEA]
    endosome [IDA]
    perinuclear region of cytoplasm [IEA]
    cytoplasm [IDA]
    synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex [IDA]
    membrane raft [IDA]
    synaptobrevin 2-SNAP-25-syntaxin-1a complex [IDA]
    cell junction [IEA]
    SNARE complex [IDA]
    Biological Process: long-term memory [IMP]
    calcium ion-dependent exocytosis of neurotransmitter [IDA]
    axonogenesis [IEP]
    endosome transport [IDA]
    growth hormone secretion [IEP]
    positive regulation of hormone secretion [IMP]
    sleep [IDA]
    positive regulation of insulin secretion [IEP]
    exocytosis [TAS]
    neurotransmitter secretion [UNKNOWN]
    regulation of synaptogenesis [IEP]
    Molecular Function: voltage-gated potassium channel activity [IDA]
    protein binding [UNKNOWN][IPI]
    syntaxin-1 binding [IDA][IPI]
    protein N-terminus binding [IPI]
    SNAP receptor activity [TAS]
    myosin binding [IPI]
    SNARE binding [UNKNOWN][IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDADMRNE LEEMQRRADQ LADESLESTR RMLQLVEESK DAGIRTLVML DEQGEQLERI  60
   61 EEGMDQINKD MKEAEKNLTD LGKFCGLCVC PCNKLKSSDA YKKAWGNNQD GVVASQPARV 120
  121 VDEREQMAIS GGFIRRVTND ARENEMDENL EQVSGIIGNL RHMALDMGNE IDTQNRQIDR 180
  181 IMEKADSNKT RIDEANQRAT KMLGSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 8.39794 Synaptosomal-assosiated protein SNAP-25
    2 View Details [104..206] PSI-BLAST 14.30103 Synaptosomal-assosiated protein SNAP-25


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle