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Protein Overview: gi|197245971, gi...

General Information:
Name(s) found: gi|34851573 [NCBI NR]
gi|197245971 [NCBI NR]
gi|157823281 [NCBI NR]
gi|149037945 [NCBI NR]
gi|109508602 [NCBI NR]
Description(s) found:
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  • gi|34851573|ref|XP_341669.1| PREDICTED: similar to Anaphase-promoting complex subunit 10 (APC10) (Cyclosome subunit 10) [Rattus norvegicus] [NCBI NR]
  • gi|197245971|gb|AAI68746.1| Anaphase promoting complex subunit 10 [Rattus norvegicus] [NCBI NR]
  • gi|157823281|ref|NP_001101915.1| anaphase promoting complex subunit 10 [Rattus norvegicus] [NCBI NR]
  • gi|149037945|gb|EDL92305.1| anaphase promoting complex subunit 10 (predicted) [Rattus norvegicus] [NCBI NR]
  • gi|109508602|ref|XP_001070328.1| PREDICTED: similar to Anaphase-promoting complex subunit 10 (APC10) (Cyclosome subunit 10) [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):19-29576388 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to RIKEN cDNA 1500026N15 gene [HMR_022704-rand.fasta]
  • similar to RIKEN cDNA 1500026N15 gene [Rattus norvegicus]gi|35900980|ref|NP_081180.1| anaphase-promoting complex subunit 10 [Mus musculus]gi|21618682|gb|AAH31460.1| Anaphase-promoting complex subunit 10 [Mus musculus]gi|26334441|dbj|BAC30921.1| unnamed [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to Anaphase-promoting complex subunit 10 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to RIKEN cDNA 1500026N15 gene [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • anaphase promoting complex subunit 10 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • anaphase promoting complex subunit 10 (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO RIKEN CDNA 1500026N15 GENE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • PREDICTED: similar to Anaphase-promoting complex subunit 10 (APC10) (Cyclosome subunit 10) [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Anapc10 Anaphase promoting complex subunit 10 [rat-ipi-250309-contam.fasta]
  • Anaphase promoting complex subunit 10 OS=Rattus norvegicus GN=Anapc10 [011711_HMR.fasta]
  • Anaphase promoting complex subunit 10 OS=Rattus norvegicus GN=Anapc10 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Anaphase-promoting complex subunit 10 OS=Rattus norvegicus GN=Anapc10 PE=2 SV=1 [20141208_RAT.fasta]
    • Organism: Rattus norvegicus
    Length: 185 amino acids

    Gene Ontology:
    Cellular Component: anaphase-promoting complex [UNKNOWN][IEA]
    cytosol [UNKNOWN]
    nucleoplasm [UNKNOWN]
    Biological Process: regulation of mitotic metaphase/anaphase transition [IEA]
    protein K11-linked ubiquitination [UNKNOWN][IEA]
    anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process [UNKNOWN]
    positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [UNKNOWN]
    negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle [UNKNOWN]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPNKTPPG ADPKQLERTA TVREIGSQAV WSLSSCKPGF GVDQLRDDNL ETYWQSDGSQ  60
   61 PHLVNIQFRR KTTVKTLCIY ADYKSDESYT PSKISVRVGN NFHNLQEIRQ LELVEPSGWI 120
  121 HVPLTDNHKK PTRTFMIQIA VLANHQNGRD THMRQIKIYT PVEESSIGKF PRCTTIDFMM 180
  181 YRSIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] PSI-BLAST 70.045757 APC10/DOC1 subunit of the anaphase-promoting complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  6.427112868929 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  6.29598849092712 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  5.30907713949929 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  4.14514352069465 bayes_pls_golite062009
  • binding
    		•  2.31774167130542 bayes_pls_golite062009
  • ligase activity
    		•  2.23368019733876 bayes_pls_golite062009
  • protein binding
    		•  0.858220907931067 bayes_pls_golite062009
  • hydrolase activity
    		•  0.690426836233441 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.533285414042183 bayes_pls_golite062009
  • DNA binding
    		•  0.324772578014229 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle