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Protein Overview: VDAC1_RAT

General Information:
Name(s) found: VDAC1_RAT [Swiss-Prot]
Description(s) found:
Found 24 descriptions.
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  • Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus GN=Vdac1 PE=1 SV=4 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [UNKNOWN][IEA]
    membrane [ISS]
    pore complex [IEA]
    mitochondrial outer membrane [IDA]
    mitochondrial inner membrane [UNKNOWN]
    plasma membrane [IEA]
    mitochondrial nucleoid [UNKNOWN]
    Biological Process: nerve-nerve synaptic transmission [UNKNOWN]
    transmembrane transport [IEA]
    apoptosis [IEA]
    synaptic transmission [UNKNOWN]
    anion transport [IEA]
    learning [UNKNOWN]
    mitochondrial calcium ion transport [IDA]
    behavioral fear response [UNKNOWN]
    Molecular Function: nucleotide binding [IEA]
    voltage-gated anion channel activity [IDA][ISS]
    protein binding [UNKNOWN][IPI]
    anion channel activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPPTYADL GKSARDVFTK GYGFGLIKLD LKTKSENGLE FTSSGSANTE TTKVNGSLET  60
   61 KYRWTEYGLT FTEKWNTDNT LGTEITVEDQ LARGLKLTFD SSFSPNTGKK NAKIKTGYKR 120
  121 EHINLGCDVD FDIAGPSIRG ALVLGYEGWL AGYQMNFETS KSRVTQSNFA VGYKTDEFQL 180
  181 HTNVNDGTEF GGSIYQKVNK KLETAVNLAW TAGNSNTRFG IAAKYQVDPD ACFSAKVNNS 240
  241 SLIGLGYTQT LKPGIKLTLS ALLDGKNVNA GGHKLGLGLE FQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] Pfam 5.920819 No description for PF01459.13 was found. No confident structure predictions are available.
    2 View Details [164..283] FFAS03 1.01 No description for 2ervA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle