General Information: |
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Name(s) found: |
SMBP2_RAT
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Rattus norvegicus |
Length: | 988 amino acids |
Gene Ontology: |
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Cellular Component: |
growth cone
[IEA]
nucleus [UNKNOWN][ISS] perinuclear region of cytoplasm [IEA] ribonucleoprotein complex [IEA] cytoplasm [UNKNOWN][ISS] neuronal cell body [UNKNOWN][IEA] cell projection [IEA] axon [IEA] SMN complex [UNKNOWN][IEA] |
Biological Process: |
negative regulation of transcription from RNA polymerase II promoter
[IDA]
spinal cord motor neuron differentiation [UNKNOWN][IEA] protein homooligomerization [UNKNOWN][IEA] regulation of transcription [IEA] |
Molecular Function: |
DNA-dependent ATPase activity
[UNKNOWN][ISS]
zinc ion binding [IEA] RNA-dependent ATPase activity [UNKNOWN][ISS] helicase activity [IEA] transcription factor binding [UNKNOWN][IEA] tRNA binding [UNKNOWN][ISS] protein self-association [ISS] nucleotide binding [IEA] DNA binding [UNKNOWN][IDA][IEA] ATP binding [UNKNOWN][IEA][ISS] RNA binding [UNKNOWN][ISS] protein binding [UNKNOWN] RNA polymerase II transcription factor activity [IDA] ATP-dependent 5'-3' DNA helicase activity [UNKNOWN][ISS] metal ion binding [IEA] ribosome binding [UNKNOWN][ISS] ATP-dependent 5'-3' RNA helicase activity [UNKNOWN][ISS] nucleoside-triphosphatase activity [IEA] hydrolase activity [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MASYTVESFV AQQLQLLELE RDAEVEERRS WQEHSSLKEL QSRGVCLLKL QVSGQRTGLY 60 61 GQRLVTFEPR KFGPAVVLPS NSFTSGDIVG LYDTNESSQL ATGVLTRITQ KSVIVAFDES 120 121 HDFQLNLDRE NTYRLLKLAN DVTYKRLKKA LLTLKKYHSG PASSLIDVLL GGSTPSPATE 180 181 IPPLTFYNTT LDPSQKEAVS FALAQKEVAI IHGPPGTGKT TTVVEIILQA VKQGLKVLCC 240 241 APSNIAVDNL VERLALCKKQ ILRLGHPARL LESVQQHSLD AVLARSDNAQ IVADIRRDID 300 301 QVFGKNKKTQ DKREKSNFRN EIKLLRKELK EREEAAIVQS LSAADVVLAT NTGASTDGPL 360 361 KLLPEDYFDV VVVDECAQAL EASCWIPLLK APKCILAGDH KQLPPTTVSH KAALAGLSRS 420 421 LMERLAEKHG AAVVRMLAVQ YRMHQAITRW ASEAMYHGQL TAHPSVAGHL LKDLPGVADT 480 481 EETSVPLLLI DTAGCGLLEL EEEDSQSKGN PGEVRLVTLH IQALVDAGVQ AGDIAVIAPY 540 541 NLQVDLLRQS LSNKHPELEI KSVDGFQGRE KEAVILTFVR SNRKGEVGFL AEDRRINVAV 600 601 TRARRHVAVI CDSHTVNNHA FLKTLVDYFT EHGEVRTAFE YLDDIVPENY THEGSRSHSC 660 661 APKPKCPTTS VRKPASAQES RQEARAATGH SRRKPSEKPL GSQVQPQHSS KANGSDRTGG 720 721 TDRTEHFRAM IEEFVASKEA QLEFPTSLSS HDRLRVHQLA EEFGLKHDST GEGKARHITV 780 781 SRRSPAGSGS ATPQPPSPPS PAQAEPEPQV EQPVGQPHGS TQLDLKALHL ERLQRQQGCQ 840 841 AQSQLGGGSR PQKAPQKKKK KEPKGPAMAL PSEEDFDALV SAVVKADNTC SFTKCSASTT 900 901 TLGQFCMHCS RRYCLSHHLP EIHGCGEKAR AHARQRISRE GVLYAGSGTK DRALDPAKRA 960 961 QLQRKLDKKL GELSSQRTSK KKEKERGT |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)