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Protein Overview: gi|153202460, gi...

General Information:
Name(s) found: gi|254931472 [NCBI NR]
gi|153202460 [NCBI NR]
gi|133735235 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|254931472|ref|ZP_05264831.1| GTPase ObgE [Listeria monocytogenes HPB2262] [NCBI NR]
  • gi|153202460|ref|ZP_01943996.1| hypothetical protein LMSG_00863 [Listeria monocytogenes HPB2262] [NCBI NR]
  • gi|133735235|gb|EBA36933.1| hypothetical protein LMSG_00863 [Listeria monocytogenes HPB2262] [NCBI NR]
    • Organism: Listeria monocytogenes HPB2262
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVDQVKIYV KAGNGGDGMV AFRREKFVPN GGPAGGDGGK GADVVFVVDE GLRTLVDFRF  60
   61 KRIFKAEHGE HGMSKSMHGR GAEDLVVKVP QGTIVKDIDT GEIIADLVAH GQRAVIAKAG 120
  121 RGGRGNKRFA TPANPAPELS ENGEPGQERN VQLELKVLAD VGLVGFPSVG KSTLLSVVSA 180
  181 ARPKIAAYHF TTIVPNLGMV DAGDGRSFVM ADLPGLIEGA SQGVGLGHQF LRHIERTRVI 240
  241 VHVIDMSGSE GRVPYEDYMA INNELEQYNL RLMERPQIIV ANKMDMPDAE ENLNEFKTKI 300
  301 AEDIPVFPIS AVTKTGLREL LLAIADKLET TPEFPLNEIL EQEDEDTVLY KYVAEEPDFE 360
  361 ISREPDGTFV LSGAKIERLF TMTNFERDAS ISRFARQLRA MGVDEALRKR GAKDGDIVRL 420
  421 LDYEFEFMD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..335] PSI-BLAST 69.69897 Obg GTP-binding protein N-terminal domain; Obg GTP-binding protein C-terminal domain
    2 View Details [336..429] PSI-BLAST 33.69897 YchF GTP-binding protein N-terminal domain; YchF GTP-binding protein, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • GTPase activity
    		•  2.7209594329073 bayes_pls_golite062009
  • binding
    		•  2.21604035604783 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.94708387424268 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  0.93133090558732 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.91827876091109 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.913322399315129 bayes_pls_golite062009
  • two-component response regulator activity
    		•  0.842299569386707 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.738234102557832 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.569910969126728 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.568840867400671 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.568779924702229 bayes_pls_golite062009
  • nucleotide binding
    		•  0.564275755355315 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.471461153565539 bayes_pls_golite062009
  • signal transducer activity
    		•  0.471461153565539 bayes_pls_golite062009
  • hydrolase activity
    		•  0.441914529351098 bayes_pls_golite062009
  • DNA binding
    		•  0.376487324624615 bayes_pls_golite062009
  • translation regulator activity
    		•  0.29096092258568 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.274994961137851 bayes_pls_golite062009
  • ATP binding
    		•  0.1860481660648 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.152859582615242 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.150159515184919 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.138615225841109 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0880086189831292 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.0746809525189132 bayes_pls_golite062009
  • structural molecule activity
    		•  0.0558641287316701 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.0557582578674931 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.0529869469040288 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle