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Protein Overview: OTU6B_MOUSE

General Information:
Name(s) found: OTU6B_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|81900999|sp|Q8K2H2.1|OTU6B_MOUSE RecName: Full=OTU domain-containing protein 6B [NCBI NR]
  • gi|74139552|dbj|BAE40913.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|56541230|gb|AAH87552.1| OTU domain containing 6B [Mus musculus] [NCBI NR]
  • gi|22779903|ref|NP_690025.1| OTU domain containing 6B [Mus musculus] [NCBI NR]
  • gi|21618702|gb|AAH31474.1| OTU domain containing 6B [Mus musculus] [NCBI NR]
  • gi|148673659|gb|EDL05606.1| mCG2665, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|123230109|emb|CAM22570.1| ortholog of human CGI-77 [Mus musculus] [NCBI NR]
  • OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):4-14349489 Similar to CGI-77 protein [hmr_yeast5_DM3-1_pombe.fasta]
  • RIKEN cDNA 2600013N14 [HMR_022704-rand.fasta]
  • RIKEN cDNA 2600013N14 [Mus musculus]gi|21618702|gb|AAH31474.1| RIKEN cDNA 2600013N14 [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 OTU domain-containing protein 6B [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • OTU domain containing 6B [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Tax_Id=10090 RIKEN cDNA 2600013N14 [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta]
  • OTU domain-containing protein 6B [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG2665, isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 RIKEN CDNA 2600013N14 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Otud6b OTU domain-containing protein 6B [zeeyong.fasta]
  • OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b [122011_mus.fasta]
  • sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVVAEELD DEEQLVRRHR KEKKELQAKI QGMKNAVPKN DKKRRKQLTE DVAKLEREME  60
   61 QKHREELEQL KQLTFKDSKI DSVAVNISNL VLENQPPRIS KAQKRREKKA ALEKEREERI 120
  121 AEAEIENLSG ARHLESEKLA QILAARELEI KQIPSDGHCM YGALEDQLRE QDCALTVASL 180
  181 RRQTAEYMQT HSDDFLPFLT NPSTGDMYTP EEFGKYCDDI VNTAAWGGQL ELRALSHILQ 240
  241 TPIEILQADA PPIIVGEEYP RNPLVLVYMR HAYGLGEHYN SVTRLVNSAT ENCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 4.69897 No description for 2i1jA was found.
    2 View Details [156..294] PSI-BLAST 3.69897 Structure of Otubain-2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  3.40148357876466 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.21949433847862 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • hydrolase activity
    		•  2.29464693834116 bayes_pls_golite062009
  • endopeptidase activity
    		•  2.26699762664334 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • binding
    		•  0.586727415287325 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.500110970732392 bayes_pls_golite062009
  • protein binding
    		•  0.130065210618838 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle