YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FIGLA_MOUSE

General Information:
Name(s) found: FIGLA_MOUSE [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|6753876|ref|NP_036143.1| folliculogenesis specific basic helix-loop-helix [Mus musculus] [NCBI NR]
  • gi|51315807|sp|O55208.1|FIGLA_MOUSE RecName: Full=Factor in the germline alpha; Short=FIGalpha; AltName: Full=Transcription factor FIGa [NCBI NR]
  • gi|2795861|gb|AAB97139.1| transcription factor FIGa [Mus musculus] [NCBI NR]
  • gi|148666738|gb|EDK99154.1| folliculogenesis specific basic helix-loop-helix [Mus musculus] [NCBI NR]
  • Factor in the germline alpha OS=Mus musculus GN=Figla PE=2 SV=1 [Swiss-Prot]
  • (O55208) Factor in the germline alpha (Transcription factor FIGa) (FIGalpha) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):6-86515870 Transcription factor FIGa [hmr_yeast5_DM3-1_pombe.fasta]
  • factor in the germline alpha; FIG alpha [HMR_022704-rand.fasta]
  • Factor in the germline alpha [ipi.MOUSE.v3.06.fasta]
  • Factor in the germline alpha (Transcription factor FIGa) (FIGalpha)gi|6753876|ref|NP_036143.1| factor in the germline alpha [Mus musculus]gi|2795861|gb|AAB97139.1| transcription factor FIGa [Mus musculus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Factor in the germline alpha [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_012013) factor in the germline alpha; FIG alpha [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • factor in the germline alpha [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Factor in the germline alpha (FIGalpha) (Transcription factor FIGa) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • folliculogenesis specific basic helix-loop-helix [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • transcription factor FIGa [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 FACTOR IN THE GERMLINE ALPHA [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Figla Factor in the germline alpha [mouse-ipi-250309-contam.fasta]
  • Factor in the germline alpha (Transcription factor FIGa) (FIGalpha) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Figla Factor in the germline alpha ENSMUSG00000030001 IPI00116617 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • IPI:IPI00116617.1|SWISS-PROT:O55208|ENSEMBL:ENSMUSP00000032070|REFSEQ:NP_036143 Tax_Id=10090 Gene_Symbol=Figla Factor in the germline alpha [ipi.MOUSE.fasta.20090209]
  • Factor in the germline alpha OS=Mus musculus GN=Figla [011711_HMR.fasta]
  • sp|O55208|FIGLA_MOUSE Factor in the germline alpha OS=Mus musculus GN=Figla PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|H6UWL1|H6UWL1_MOUSE Factor in the germline alpha OS=Mus musculus GN=Figla PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Isoform of O55208, Factor in the germline alpha OS=Mus musculus GN=Figla PE=2 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    transcription factor complex [ISS]
    Biological Process: transcription [IEA]
    oogenesis [IEA]
    multicellular organismal development [IEA]
    cell differentiation [IEA]
    regulation of transcription [IEA]
    Molecular Function: DNA binding [IEA]
    transcription regulator activity [IEA]
    sequence-specific DNA binding [ISS]
    transcription factor binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAPASPEP FLVTPQAEVL EELIQAQMGP LPRLAAICRL KRLPSGGYST TDDLHLVLER  60
   61 RRVANAKERE RIKNLNRGFA KLKALVPFLP QSRKPSKVDI LKGATEYIQI LGCVLEEAKV 120
  121 SEKQSPEEQT HSGRPSDPHV SSTRELLGNA TQPTSCASGL KKEEEGPWAY AGHSEPLYSY 180
  181 HQSTVPETRS YFTH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 13.69897 Myc prot-oncogene protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.38152275390446 bayes_pls_golite062009
  • transcription factor activity
    		•  3.04280835647305 bayes_pls_golite062009
  • DNA binding
    		•  2.90141674767619 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.47998473034448 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.37053987886767 bayes_pls_golite062009
  • transcription activator activity
    		•  1.74319543447013 bayes_pls_golite062009
  • protein binding
    		•  1.62223000080562 bayes_pls_golite062009
  • transcription factor binding
    		•  1.43375582831514 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.28591007735391 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.25959178854241 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.58915685754167 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
    		•  0.57893998216372 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.400231642545219 bayes_pls_golite062009
  • promoter binding
    		•  0.23048060885883 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle