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Protein Overview: RAE1E_MOUSE

General Information:
Name(s) found: RAE1E_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|38258646|sp|Q9CZQ6.1|RAE1E_MOUSE RecName: Full=Retinoic acid early-inducible protein 1-epsilon; Short=RAE-1-epsilon; Flags: Precursor [NCBI NR]
  • gi|38016148|ref|NP_937836.1| retinoic acid early transcript 1E [Mus musculus] [NCBI NR]
  • gi|16327425|gb|AAL17719.1| retanoic acid early transcript 1 epsilon [Mus musculus] [NCBI NR]
  • gi|15990602|gb|AAL11004.1| retinoic acid early transcript 1 epsilon [Mus musculus] [NCBI NR]
  • gi|12848941|dbj|BAB28147.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|124376370|gb|AAI32309.1| Retinoic acid early transcript 1E [Mus musculus] [NCBI NR]
  • (Q9CZQ6) Retinoic acid early inducible protein 1 epsilon precursor (RAE-1epsilon) [Swiss-Prot]
  • Retinoic acid early-inducible protein 1-epsilon OS=Mus musculus GN=Raet1e PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):None Retinoic acid early inducible protein 1 gamma precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • retinoic acid early transcript 1E [HMR_022704-rand.fasta]
  • retinoic acid early transcript 1E [Mus musculus]gi|16327425|gb|AAL17719.1| retanoic acid early transcript 1 epsilon [Mus musculus]gi|15990602|gb|AAL11004.1| retinoic acid early transcript 1 epsilon [Mus musculus]gi|38258646|sp|Q9CZQ6|RT1E_MOUSE Retinoi [nrdb_11152004_Chlamydomonas]
  • Retinoic acid early inducible protein 1 epsilon precursor [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 Retinoic acid early inducible protein 1 epsilon precursor [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • retinoic acid early transcript 1E [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Retinoic acid early-inducible protein 1-epsilon precursor (RAE-1-epsilon) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Retinoic acid early transcript 1E [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • retanoic acid early transcript 1 epsilon [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • retinoic acid early transcript 1 epsilon [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 RETINOIC ACID EARLY INDUCIBLE PROTEIN 1 EPSILON PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Raet1e Retinoic acid early-inducible protein 1-epsilon [mouse-ipi-250309-contam.fasta]
  • retinoic acid early transcript 1E precursor [Mus musculus] [NCBI-RefSeq_mouse_na_09-14-2009_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Raet1e Retinoic acid early-inducible protein 1-epsilon precursor [ipi.MOUSE_jw_12may08.contam.fasta]
  • Retinoic acid early inducible protein 1 epsilon precursor (RAE-1epsilon) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Raet1e Retinoic acid early inducible protein 1 epsilon precursor [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Raet1e Retinoic acid early-inducible protein 1-epsilon precursor ENSMUSG00000053219 IPI00113022 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • retinoic acid early-inducible protein 1-epsilon precursor [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00113022.1|SWISS-PROT:Q9CZQ6|TREMBL:A2RSZ5|ENSEMBL:ENSMUSP00000059112;ENSMUSP00000066627;ENSMUSP00000101162|REFSEQ:NP_937836 Tax_Id=10090 Gene_Symbol=Raet1e Retinoic acid early-inducible protein 1-epsilon [ipi.MOUSE.fasta.20090209]
  • Retinoic acid early-inducible protein 1-epsilon OS=Mus musculus GN=Raet1e [011711_HMR.fasta]
  • Retinoic acid early-inducible protein 1-epsilon OS=Mus musculus GN=Raet1e PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9CZQ6|RAE1E_MOUSE Retinoic acid early-inducible protein 1-epsilon OS=Mus musculus GN=Raet1e PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|D7F2B6|D7F2B6_MOUSE Retinoic acid early transcript 1E OS=Mus musculus GN=Raet1e PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Retinoic acid early transcript 1E OS=Mus musculus GN=Raet1e PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Isoform of Q9CZQ6, Retinoic acid early transcript 1E OS=Mus musculus GN=Raet1e PE=2 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 251 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    plasma membrane [IEA]
    anchored to membrane [IEA]
    Biological Process: immune response [IEA]
    antigen processing and presentation [IEA]
    Molecular Function: natural killer cell lectin-like receptor binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAAVTKRH HFMIQKLLIL LSYGYTNGLD DAHSLRCNLT IKDPTSADLP WCDVKCSVDE  60
   61 ITILHLNNIN KTMTSGDPGK MANATGKCLT QPLNDLCQEL RDKVSNTKVD THKTNGYPHL 120
  121 QVTMIYPQSQ GQTPSATWEF NISDSYFFTF YTENMSWRSA NDESGVIMNK WKDDGDLVQQ 180
  181 LKYFIPQCRQ KIDEFLKQSK EKPRSTSRSP SITQLTSTSP LPPPSHSTSK KGFISVGLIF 240
  241 ISLLFAFAFA M

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] PSI-BLAST 37.09691 NK cell ligand RAE-1 beta

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • olfactory receptor activity
    		•  5.33587116950969 bayes_pls_golite062009
  • antigen binding
    		•  4.46241992460507 bayes_pls_golite062009
  • peptide antigen binding
    		•  4.35858424470161 bayes_pls_golite062009
  • MHC class I receptor activity
    		•  3.41449694100623 bayes_pls_golite062009
  • endogenous lipid antigen binding
    		•  3.2718839441674 bayes_pls_golite062009
  • receptor activity
    		•  3.00266491683196 bayes_pls_golite062009
  • natural killer cell lectin-like receptor binding
    		•  2.87337850935774 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.86520164199147 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.56374296515227 bayes_pls_golite062009
  • signal transducer activity
    		•  2.56374296515227 bayes_pls_golite062009
  • protein binding
    		•  2.20481087437436 bayes_pls_golite062009
  • binding
    		•  1.90626658068048 bayes_pls_golite062009
  • IgG binding
    		•  1.85116965480634 bayes_pls_golite062009
  • lipid antigen binding
    		•  1.19229113780113 bayes_pls_golite062009
  • receptor binding
    		•  0.96769592478452 bayes_pls_golite062009
  • IgG receptor activity
    		•  0.93675845777404 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.44365180492849 bayes_pls_golite062009
  • peptide binding
    		•  0.20607041314192 bayes_pls_golite062009
  • catalytic activity
    		•  0.115804452291889 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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