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Protein Overview: CE39813

General Information:
Name(s) found: CE39813 [WormBase]
Description(s) found:
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  • WBGene00021225 status:Predicted UniProt:Q966D8 protein_id:CCD64367.1 [WormBase]
  • gi|145312325|gb|AAK68410.3|AC006722_2 Hypothetical protein Y19D10A.10 [Caenorhabditis elegans] [NCBI NR]
  • gi|115534562|ref|NP_503653.3| hypothetical protein Y19D10A.10 [Caenorhabditis elegans] [NCBI NR]
  • CE39813 WBGene00021225 status:Predicted UniProt:Q966D8_CAEEL protein_id:AAK68410.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39813 WBGene00021225 status:Predicted UniProt:Q966D8_CAEEL protein_id:AAK68410.3| [wormORF-contam.fasta]
  • CE39813 WBGene00021225 status:Predicted TR:Q966D8 protein_id:AAK68410.2 [wormpep160-contam.fasta]
  • Y19D10A.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39813 WBGene00021225 status:Predicted TR:Q966D8 protein_id:AAK68410.3 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE39813 WBGene00021225 status:Predicted UniProt:Q966D8 protein_id:AAK68410.3 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39813 WBGene00021225 status:Predicted UniProt:Q966D8 protein_id:CCD64367.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 703 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    phosphate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFDYKVHST LPHIPKTPSF AFWNRTRIYI MVLTLACLTF IQINTVIFNF TVICMEDIVE  60
   61 DYNLLTNYTG THWFQRTTEK SLLFSGAAIG GLIGLIPSVP LINSIGLRNF QTISGLISAL 120
  121 GALLFPLAVS IDFYSSFLCR VLQGMGSSII FTSVGVVPGV WAPSNETNTF TAILSCALQL 180
  181 GNIICMPVSG FLCESSLGWR SIYYLFGGLT AIIFIMFWFT YTDDPKLHRL TEIQILKIHF 240
  241 FGKNVSENCE VHPTTSDGRL PKIRKTSSFV FWNKTRMFIM ILTLACLTFI QINTLLFNFT 300
  301 VICMEDVVEN YNLLTNYTAT HWFQRNTEKS LLFSGVAIGG LIGLIPSVPL INALGLRNVQ 360
  361 TISGLISAFG ALLFPLAVSI GFYTTLLCRI LQGMGSAVMF TSVGVVPNVW APRNEANTFM 420
  421 AILSCALQLS NIICMPVSGL LCESALGWRS IYYLFGGLTF IMFIVFWISY KDDPKMYRKR 480
  481 NLKKSPAAKL SRYLAICTDP TVLITWITCF GGFVGLYSLS LYGPTYLREI LKFDVRETGF 540
  541 LSALPFILSA IIKFAAGKIS DKLSFLSEKS RFVFFAATSQ IGFVAGLLVM AFTTNRLIAQ 600
  601 IAFNFAIVSS GMNVMGVFKV VQLRCLQHVH FAIAVISFTT YLVQFLAPVI VGIICPDNTP 660
  661 AQWTTLFLVI SAIIIVCTVG FPFLTKSDAA DYTKKKTVES CRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] FFAS03 6.82 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [276..703] PSI-BLAST 40.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.17122575244927 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.40082803797762 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.15136138921997 bayes_pls_golite062009
  • transporter activity
    		•  3.82096685159505 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.72315344358443 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.34396155292818 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.32643461660963 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.38147400623282 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.05049771748124 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.55146182911318 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.46819549608723 bayes_pls_golite062009
  • binding
    		•  1.278768212932 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.869150152038001 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.339747214378126 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.339747214378126 bayes_pls_golite062009
  • symporter activity
    		•  0.327558013224678 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.327558013224678 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.222664452597504 bayes_pls_golite062009
    2
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.78662033436109 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.26757615356623 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle