| Protein: | CE39813 |
| Organism: | Caenorhabditis elegans |
| Length: | 703 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39813.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..233] | [701..520] |
|
Region A: Residues: [1-275] |
1 11 21 31 41 51
| | | | | |
1 MAFDYKVHST LPHIPKTPSF AFWNRTRIYI MVLTLACLTF IQINTVIFNF TVICMEDIVE 60
61 DYNLLTNYTG THWFQRTTEK SLLFSGAAIG GLIGLIPSVP LINSIGLRNF QTISGLISAL 120
121 GALLFPLAVS IDFYSSFLCR VLQGMGSSII FTSVGVVPGV WAPSNETNTF TAILSCALQL 180
181 GNIICMPVSG FLCESSLGWR SIYYLFGGLT AIIFIMFWFT YTDDPKLHRL TEIQILKIHF 240
241 FGKNVSENCE VHPTTSDGRL PKIRKTSSFV FWNKT
|
| Detection Method: |  |
| Confidence: | 6.82 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.17122575244927 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.40082803797762 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.15136138921997 | bayes_pls_golite062009 |
| transporter activity | 3.82096685159505 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.72315344358443 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.34396155292818 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.32643461660963 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 2.38147400623282 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.05049771748124 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.55146182911318 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.46819549608723 | bayes_pls_golite062009 |
| binding | 1.278768212932 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 0.869150152038001 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.222664452597504 | bayes_pls_golite062009 |
|
Region A: Residues: [276-703] |
1 11 21 31 41 51
| | | | | |
1 RMFIMILTLA CLTFIQINTL LFNFTVICME DVVENYNLLT NYTATHWFQR NTEKSLLFSG 60
61 VAIGGLIGLI PSVPLINALG LRNVQTISGL ISAFGALLFP LAVSIGFYTT LLCRILQGMG 120
121 SAVMFTSVGV VPNVWAPRNE ANTFMAILSC ALQLSNIICM PVSGLLCESA LGWRSIYYLF 180
181 GGLTFIMFIV FWISYKDDPK MYRKRNLKKS PAAKLSRYLA ICTDPTVLIT WITCFGGFVG 240
241 LYSLSLYGPT YLREILKFDV RETGFLSALP FILSAIIKFA AGKISDKLSF LSEKSRFVFF 300
301 AATSQIGFVA GLLVMAFTTN RLIAQIAFNF AIVSSGMNVM GVFKVVQLRC LQHVHFAIAV 360
361 ISFTTYLVQF LAPVIVGIIC PDNTPAQWTT LFLVISAIII VCTVGFPFLT KSDAADYTKK 420
421 KTVESCRS
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 5.46247398538901 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 4.58978526526921 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 4.31967711223954 | bayes_pls_golite062009 |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.94605227012838 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 2.52916479889426 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.78662033436109 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
