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Protein Overview: CC21C_MOUSE, CC2...

General Information:
Name(s) found: CC21C_MOUSE [Swiss-Prot]
CC21B_MOUSE [Swiss-Prot]
Description(s) found:
Found 52 descriptions.
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  • C-C motif chemokine 21c OS=Mus musculus GN=Ccl21c PE=1 SV=1 [Swiss-Prot]
  • C-C motif chemokine 21b OS=Mus musculus GN=Ccl21b PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 133 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [IEA]
    extracellular region [IEA]
    cellular_component [ND]
    Biological Process: chemotaxis [IEA]
    biological_process [ND]
    inflammatory response [IEA]
    immune response [IEA]
    Molecular Function: cytokine activity [IEA]
    chemokine activity [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQMMTLSLL SLVLALCIPW TQGSDGGGQD CCLKYSQKKI PYSIVRGYRK QEPSLGCPIP  60
   61 AILFLPRKHS KPELCANPEE GWVQNLMRRL DQPPAPGKQS PGCRKNRGTS KSGKKGKGSK 120
  121 GCKRTEQTQP SRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] PSI-BLAST 16.39794 MONOCYTE CHEMOATTRACTANT PROTEIN-3, NMR, MINIMIZED AVERAGE STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chemokine activity
    		•  4.89918398910885 bayes_pls_golite062009
  • chemokine receptor binding
    		•  4.89918398910885 bayes_pls_golite062009
  • cytokine activity
    		•  4.83557343632317 bayes_pls_golite062009
  • G-protein-coupled receptor binding
    		•  4.76558176153203 bayes_pls_golite062009
  • binding
    		•  3.18185781962524 bayes_pls_golite062009
  • receptor binding
    		•  3.05971926490912 bayes_pls_golite062009
  • protein binding
    		•  2.65575365603289 bayes_pls_golite062009
  • interleukin-8 receptor binding
    		•  2.32709632592014 bayes_pls_golite062009
  • chemoattractant activity
    		•  1.20748075091352 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0477394461694876 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0477394461694876 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle