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Protein Overview: RNAS4_MOUSE

General Information:
Name(s) found: RNAS4_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|8272449|dbj|BAA96476.1| RNase 4 [Mus musculus] [NCBI NR]
  • gi|20139747|sp|Q9JJH1.1|RNAS4_MOUSE RecName: Full=Ribonuclease 4; Short=RNase 4; Flags: Precursor [NCBI NR]
  • gi|148688896|gb|EDL20843.1| mCG16519, isoform CRA_b [Mus musculus] [NCBI NR]
  • gi|148688895|gb|EDL20842.1| mCG16519, isoform CRA_b [Mus musculus] [NCBI NR]
  • gi|13542728|gb|AAH05569.1| Rnase4 protein [Mus musculus] [NCBI NR]
  • (Q9JJH1) Ribonuclease 4 precursor (EC 3.1.27.-) (RNase 4) [Swiss-Prot]
  • Ribonuclease 4 OS=Mus musculus GN=Rnase4 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):14-42475289 Ribonuclease 4 precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • ribonuclease, RNase A family 4; ribonuclease 4 [HMR_022704-rand.fasta]
  • RNase 4 [Mus musculus]gi|13542728|gb|AAH05569.1| Rnase4 protein [Mus musculus]gi|20139747|sp|Q9JJH1|RNS4_MOUSE Ribonuclease 4 precursor (RNase 4) [nrdb_11152004_Chlamydomonas]
  • Ribonuclease 4 precursor [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 Ribonuclease 4 precursor [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_021472) ribonuclease, RNase A family 4; ribonuclease 4 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Ribonuclease 4 precursor (RNase 4) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG16519, isoform CRA_b [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Rnase4 protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • RNase 4 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 RIBONUCLEASE 4 PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rnase4 Ribonuclease 4 [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Rnase4 Ribonuclease 4 precursor [ipi.MOUSE_jw_12may08.contam.fasta]
  • IPI:IPI00121837.1|SWISS-PROT:Q9JJH1 Tax_Id=10090 Gene_Symbol=Rnase4 Ribonuclease 4 [ipi.MOUSE.fasta.20090209]
  • Ribonuclease 4 OS=Mus musculus GN=Rnase4 [011711_HMR.fasta]
  • Ribonuclease 4 OS=Mus musculus GN=Rnase4 PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q9JJH1|RNAS4_MOUSE Ribonuclease 4 OS=Mus musculus GN=Rnase4 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 148 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEA]
    cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    endonuclease activity [IEA]
    nuclease activity [IEA]
    molecular_function [ND]
    pancreatic ribonuclease activity [IEA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDLQRTQSL LLLLVLTLLG LGLVQPSYGQ DRMYQRFLRQ HVDPQATGGN DNYCNVMMQR  60
   61 RKMTSVQCKR FNTFIHEDIW NIRGICSTTN ILCKNGQMNC HEGVVKVTDC RETGNSKAPN 120
  121 CRYRARTSTR RVVIACEGDP EVPVHFDR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 45.69897 Ribonuclease 4

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • copper ion binding
    		•  7.83873950118271 bayes_pls_golite062009
  • ribonuclease activity
    		•  7.7836205160091 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  5.76187095683544 bayes_pls_golite062009
  • heparin binding
    		•  5.47129826629317 bayes_pls_golite062009
  • polysaccharide binding
    		•  5.05032546822599 bayes_pls_golite062009
  • actin binding
    		•  4.92941980452441 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.36902055736911 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  4.32374837032673 bayes_pls_golite062009
  • receptor binding
    		•  3.75411703515817 bayes_pls_golite062009
  • pattern binding
    		•  3.51086739633778 bayes_pls_golite062009
  • nuclease activity
    		•  3.07697924678131 bayes_pls_golite062009
  • carbohydrate binding
    		•  2.53927247892334 bayes_pls_golite062009
  • binding
    		•  2.456168052491 bayes_pls_golite062009
  • RNA binding
    		•  2.36041337585723 bayes_pls_golite062009
  • protein binding
    		•  2.18342402068792 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.03519718891127 bayes_pls_golite062009
  • hydrolase activity
    		•  1.87908884191558 bayes_pls_golite062009
  • DNA binding
    		•  1.74627208866206 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.7277182307311 bayes_pls_golite062009
  • catalytic activity
    		•  1.25983854650131 bayes_pls_golite062009
  • cation binding
    		•  0.818478047973828 bayes_pls_golite062009
  • metal ion binding
    		•  0.818478047973828 bayes_pls_golite062009
  • ion binding
    		•  0.811382627786056 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle