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Protein Overview: RAE1A_MOUSE

General Information:
Name(s) found: RAE1A_MOUSE [Swiss-Prot]
Description(s) found:
Found 28 descriptions.
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  • Retinoic acid early-inducible protein 1-alpha OS=Mus musculus GN=Raet1a PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    plasma membrane [IEA]
    anchored to plasma membrane [IDA]
    anchored to membrane [IEA]
    Biological Process: immune response [IEA]
    antigen processing and presentation [IEA]
    Molecular Function: natural killer cell lectin-like receptor binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAAVTKRH HFMIQKLLIL LSYGYTNGLD DAHSLRCNLT IKDPTPADPL WYEAKCLVDE  60
   61 ILILHLSNIN KTMTSGDPGE TANATEVGEC LTQPLKDLCQ KLRNKVSNTK VDTHKTNGYP 120
  121 HLQVTMIYLQ SQGQIPSATW EFNISDSYFF TFYTENMSWR SANDESGVIM NKWKDDGEFV 180
  181 KRLKFLIPEC RQEVDEFLKQ PKEKPRSTSR SPSITQLTST SPLPPPSHST SKKGFISVGL 240
  241 IFISLLFAFA FAM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 41.0 NK cell ligand RAE-1 beta

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • olfactory receptor activity
    		•  5.33587116950969 bayes_pls_golite062009
  • antigen binding
    		•  4.46241992460507 bayes_pls_golite062009
  • peptide antigen binding
    		•  4.35858424470161 bayes_pls_golite062009
  • MHC class I receptor activity
    		•  3.41449694100623 bayes_pls_golite062009
  • endogenous lipid antigen binding
    		•  3.2718839441674 bayes_pls_golite062009
  • receptor activity
    		•  3.00266491683196 bayes_pls_golite062009
  • natural killer cell lectin-like receptor binding
    		•  2.87337850935774 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.86520164199147 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.56374296515227 bayes_pls_golite062009
  • signal transducer activity
    		•  2.56374296515227 bayes_pls_golite062009
  • protein binding
    		•  2.20481087437436 bayes_pls_golite062009
  • binding
    		•  1.90626658068048 bayes_pls_golite062009
  • IgG binding
    		•  1.85116965480634 bayes_pls_golite062009
  • lipid antigen binding
    		•  1.19229113780113 bayes_pls_golite062009
  • receptor binding
    		•  0.96769592478452 bayes_pls_golite062009
  • IgG receptor activity
    		•  0.93675845777404 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.44365180492849 bayes_pls_golite062009
  • peptide binding
    		•  0.20607041314192 bayes_pls_golite062009
  • catalytic activity
    		•  0.115804452291889 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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