| Protein: | RAE1A_MOUSE |
| Organism: | Mus musculus |
| Length: | 253 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAE1A_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
428.0 | [0..3] | [249..1] |
|
|
425.0 | [0..3] | [249..110] |
|
|
422.0 | [0..3] | [249..1] |
|
Region A: Residues: [1-253] |
1 11 21 31 41 51
| | | | | |
1 MAKAAVTKRH HFMIQKLLIL LSYGYTNGLD DAHSLRCNLT IKDPTPADPL WYEAKCLVDE 60
61 ILILHLSNIN KTMTSGDPGE TANATEVGEC LTQPLKDLCQ KLRNKVSNTK VDTHKTNGYP 120
121 HLQVTMIYLQ SQGQIPSATW EFNISDSYFF TFYTENMSWR SANDESGVIM NKWKDDGEFV 180
181 KRLKFLIPEC RQEVDEFLKQ PKEKPRSTSR SPSITQLTST SPLPPPSHST SKKGFISVGL 240
241 IFISLLFAFA FAM
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1jfmA |
| Description: | NK cell ligand RAE-1 beta |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| olfactory receptor activity | 5.33587116950969 | bayes_pls_golite062009 |
| antigen binding | 4.46241992460507 | bayes_pls_golite062009 |
| peptide antigen binding | 4.35858424470161 | bayes_pls_golite062009 |
| MHC class I receptor activity | 3.41449694100623 | bayes_pls_golite062009 |
| endogenous lipid antigen binding | 3.2718839441674 | bayes_pls_golite062009 |
| receptor activity | 3.00266491683196 | bayes_pls_golite062009 |
| natural killer cell lectin-like receptor binding | 2.87337850935774 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.86520164199147 | bayes_pls_golite062009 |
| molecular transducer activity | 2.56374296515227 | bayes_pls_golite062009 |
| signal transducer activity | 2.56374296515227 | bayes_pls_golite062009 |
| protein binding | 2.20481087437436 | bayes_pls_golite062009 |
| binding | 1.90626658068048 | bayes_pls_golite062009 |
| IgG binding | 1.85116965480634 | bayes_pls_golite062009 |
| lipid antigen binding | 1.19229113780113 | bayes_pls_golite062009 |
| receptor binding | 0.96769592478452 | bayes_pls_golite062009 |
| IgG receptor activity | 0.93675845777404 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.44365180492849 | bayes_pls_golite062009 |
| peptide binding | 0.20607041314192 | bayes_pls_golite062009 |
| catalytic activity | 0.115804452291889 | bayes_pls_golite062009 |
