General Information: |
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Name(s) found: |
SYNJ1_RAT
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Rattus norvegicus |
Length: | 1574 amino acids |
Gene Ontology: |
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Cellular Component: |
membrane coat
[UNKNOWN]
synaptosome [IDA] cytoplasm [IDA] protein complex [IDA] |
Biological Process: |
positive regulation of gliogenesis
[IMP]
response to cytokine stimulus [IMP] brain development [IEP] endocytosis [IEA] learning [UNKNOWN] phosphoinositide dephosphorylation [UNKNOWN] neurotransmitter transport [UNKNOWN] synaptic vesicle uncoating [UNKNOWN] response to retinoic acid [IMP] synaptic vesicle priming [UNKNOWN] synaptic vesicle transport [UNKNOWN] synaptic vesicle endocytosis [UNKNOWN] phosphoinositide metabolic process [UNKNOWN] dephosphorylation [IEA] positive regulation of receptor-mediated endocytosis [IMP] |
Molecular Function: |
RNA binding
[IEA]
inositol or phosphatidylinositol phosphatase activity [IDA][IEA] protein binding [UNKNOWN][IPI] phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [UNKNOWN][IEA] phosphoinositide 5-phosphatase activity [UNKNOWN] polyphosphoinositide phosphatase activity [UNKNOWN] SH3 domain binding [IDA][IPI] protein complex binding [IDA] hydrolase activity [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MAFSKGFRIY HKLDPPPFSL IVETRHKEEC LMFESGAVAV LSSAEKEAIK GTYAKVLDAY 60 61 GLLGVLRLNL GDTMLHYLVL VTGCMSVGKI QESEVFRVTS TEFISLRVDA SDEDRISEVR 120 121 KVLNSGNFYF AWSASGVSLD LSLNAHRSMQ EHTTDNRFFW NQSLHLHLKH YGVNCDDWLL 180 181 RLMCGGVEIR TIYAAHKQAK ACLISRLSCE RAGTRFNVRG TNDDGHVANF VETEQVIYLD 240 241 DCVSSFIQIR GSVPLFWEQP GLQVGSHRVR MSRGFEANAP AFDRHFRTLK DLYGKQIVVN 300 301 LLGSKEGEHM LSKAFQSHLK ASEHASDIHM VSFDYHQMVK GGKAEKLHSV LKPQVQKFLD 360 361 YGFFYFDGSA VQRCQSGTVR TNCLDCLDRT NSVQAFLGLE MLAKQLEALG LAEKPQLVTR 420 421 FQEVFRSMWS VNGDSISKIY AGTGALEGKA KLKDGARSVT RTIQNNFFDS SKQEAIDVLL 480 481 LGNTLNSDLA DKARALLTTG SLRVSEQTLQ SASSKVLKNM CENFYKYSKP KKIRVCVGTW 540 541 NVNGGKQFRS IAFKNQTLTD WLLDAPKLAG IQEFQDKRSK PTDIFAIGFE EMVELNAGNI 600 601 VNASTTNQKL WAVELQKTIS RDNKYVLLAS EQLVGVCLFV FIRPQHAPFI RDVAVDTVKT 660 661 GMGGATGNKG AVAIRMLFHT TSLCFVCSHF AAGQSQVKER NEDFVEIARK LSFPMGRMLF 720 721 SHDYVFWCGD FNYRIDLPNE EVKELIRQQN WDSLIAGDQL INQKNAGQIF RGFLEGKVTF 780 781 APTYKYDLFS EDYDTSEKCR TPAWTDRVLW RRRKWPFDRS AEDLDLLNAS FQDESKILYT 840 841 WTPGTLLHYG RAELKTSDHR PVVALIDIDI FEVEAEERQK IYKEVIAVQG PPDGTVLVSI 900 901 KSSAQENTFF DDALIDELLQ QFAHFGEVIL IRFVEDKMWV TFLEGSSALN VLSLNGKELL 960 961 NRTITITLKS PDWIKTLEEE MSLEKISVTL PSSTSSTLLG EDAEVSADFD MEGDVDDYSA1020 1021 EVEELLPQHL QPSSSSGLGT SPSSSPRTSP CQSPTAPEYS APSLPIRPSR APSRTPGPLS1080 1081 SQGAPVDTQP AAQKESSQTI EPKRPPPPRP VAPPARPAPP QRPPPPSGAR SPAPARKEFG1140 1141 GVGAPPSPGV TRREMEAPKS PGTARKDNIG RNQPSPQAGL AGPGPSGYGA ARPTIPARAG1200 1201 VISAPQSQAR VSAGRLTPES QSKPLETSKG PAVLPEPLKP QAAFPPQPSL PTPAQKLQDP1260 1261 LVPIAAPMPP SIPQSNLETP PLPPPRSRSS QSLPSDSSPQ LQQEQPTGQQ VKINGACGVK1320 1321 QEPTLKSDPF EDLSLSVLAV SKAQPSAQIS PVLTPDPKML IQLPSASQSK VNSLSSVSCM1380 1381 LTMPPVPEQS KSQESVGSSA NPFPSLPTRN PFTDRTAAPG NPFRVQSQES EATSWLSKEE1440 1441 PVSNSPFPPL MPLSHDMSKP SSSLDGFEDN FDLQSQSTVK TSNPKGWVTF DEDEDFPTKG1500 1501 KSRSVYPDSL GNTAASFDDD WSKGTNVSFC VLPARRPPPP PPPVPLLPPG TTSSAGPSTT1560 1561 LSSKASPTLD FTER |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.91 |
Source: Reynolds et al. (2008)