YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NFYC

General Information:
Name(s) found: NFYC [HGNC (HUGO)]
Description(s) found:
SHOW ONLY BEST
  • gi|55958373|emb|CAI16533.1| nuclear transcription factor Y, gamma [Homo sapiens] [NCBI NR]
  • gi|20137773|sp|Q13952.3|NFYC_HUMAN RecName: Full=Nuclear transcription factor Y subunit gamma; AltName: Full=Nuclear transcription factor Y subunit C; Short=NF-YC; AltName: Full=CAAT-box DNA-binding protein subunit C; AltName: Full=Transactivator HSM-1/2 [NCBI NR]
  • gi|119627604|gb|EAX07199.1| nuclear transcription factor Y, gamma, isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|11065912|gb|AAG28389.1|AF191744_1 NFY-C variant DS2.8 [Homo sapiens] [NCBI NR]
  • nuclear transcription factor Y, gamma [HGNC (HUGO)]
  • Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3 [Swiss-Prot]
  • (Q13952) Nuclear transcription factor Y subunit gamma (NF-Y protein chain C) (Nuclear factor YC) (NF-YC) (CCAAT-binding transcription factor subunit C) (CBF-C) (Transactivator HSM-1/2) [Swiss-Prot]
  • Splice isoform 3 of Q13952 [hmr_yeast5_DM3-1_pombe.fasta]
  • NFY-C variant DS2.8 [Homo sapiens]gi|20137773|sp|Q13952|CBFC_HUMAN Nuclear transcription factor Y subunit gamma (NF-Y protein chain C) (Nuclear factor YC) (NF-YC) (CCAAT-binding transcription factor subunit C) (CBF-C) (Transactivator HSM-1/2) [nrdb_11152004_Chlamydomonas]
  • Nuclear transcription factor Y subunit gamma (NF-Y protein chain C) (Nuclear factor YC) (NF-YC) (CCAAT-binding transcription factor subunit C) (CBF-C) (Transactivator HSM-1/2) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Splice Isoform 3 of Nuclear transcription factor Y subunit gamma [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • NFY-C variant DS2.8 [Homo sapiens] [NCBI-RefSeq_human_na_05-03-2007_con_reversed.fasta]
  • Nuclear transcription factor Y subunit gamma (Nuclear transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) (Transactivator HSM-1/2) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • nuclear transcription factor Y, gamma [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • nuclear transcription factor Y, gamma, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Isoform 3 of Nuclear transcription factor Y subunit gamma [EBI-IPI_human_3.23_11-02-2006_con_reversed.fasta]
  • Tax_Id=9606 SPLICE ISOFORM 1 OF NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=NFYC Isoform 3 of Nuclear transcription factor Y subunit gamma [human-ipi-250309-contam.fasta]
  • IPI:IPI00071697.1|SWISS-PROT:Q13952-1|TREMBL:Q8TCN9|ENSEMBL:ENSP00000312617;ENSP00000361741|VEGA:OTTHUMP00000009213 Tax_Id=9606 Gene_Symbol=NFYC Isoform 3 of Nuclear transcription factor Y subunit gamma [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=NFYC Isoform 3 of Nuclear transcription factor Y subunit gamma ENSG00000066136 IPI00071697 IPI00513987 IPI00216406 IPI00216407 IPI00646320 IPI00513906 IPI00745424 IPI00003341 IPI00644539 IPI00645066 IPI00514289 IPI00514491 [drosphohumanreversed.fasta]
  • Q13952;Q5T6K8;Q5T6L1;Q5TZR6;Q92869;Q9HBX1;Q9NXB5;Q9UM67;Q9UML0;Q9UMT7; RecName: Full=Nuclear transcription factor Y subunit gamma; AltName: Full=Nuclear transcription factor Y subunit C; AltName: Full=CAAT box DNA-binding protein subunit C; AltName: Full=Transactivator HSM-1/2; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Isoform 3 of Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC [011711_HMR.fasta]
  • IPI:IPI00071697.1|SWISS-PROT:Q13952-1|TREMBL:Q8TCN9|ENSEMBL:ENSP00000312617|VEGA:OTTHUMP00000009213 Tax_Id=9606 Gene_Symbol=NFYC Isoform 3 of Nuclear transcription factor Y subunit gamma [ipi.HUMAN.20110912.fasta]
  • Nuclear transcription factor Y subunit gamma GN=NFYC [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEGGFGGT SSSDAQQSLQ SFWPRVMEEI RNLTVKDFRV QELPLARIKK IMKLDEDVKM  60
   61 ISAEAPVLFA KAAQIFITEL TLRAWIHTED NKRRTLQRND IAMAITKFDQ FDFLIDIVPR 120
  121 DELKPPKRQE EVRQSVTPAE PVQYYFTLAQ QPTAVQVQGQ QQGQQTTSST TTIQPGQIII 180
  181 AQPQQGQTTP VTMQVGEGQQ VQIVQAQPQG QAQQAQSGTG QTMQVMQQII TNTGEIQQIP 240
  241 VQLNAGQLQY IRLAQPVSGT QVVQGQIQTL ATNAQQGQRN ASQGKPRRCL KETLQITQTE 300
  301 VQQGQQQFSQ FTDGQRNSVQ QARVSELTGE AEPREVKATG NSTPCTSSLP TTHPPSHRAG 360
  361 ASCVCCSQPQ QSSTSPPPSD ALQWVVVEVS GTPNQLETHR ELHAPLPGMT SLSPLHPSQQ 420
  421 LYQIQQVTMP AGQDLAQPMF IQSANQPSDG QAPQVTGD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 35.0 Nuclear transcription factor Y subunit gamma (Nf-Yc2)
    2 View Details [132..233] PSI-BLAST 3.522879 Sec24
    3 View Details [234..312] deduced N/A No confident structure predictions are available.
    4 View Details [313..458] MSA 2.019979 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
    		•  4.8544267677131 bayes_pls_golite062009
  • DNA binding
    		•  4.49118409263799 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.35201412176948 bayes_pls_golite062009
  • transcription regulator activity
    		•  4.08606081850613 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  3.28941584139552 bayes_pls_golite062009
  • binding
    		•  3.27510691458843 bayes_pls_golite062009
  • transcription factor activity
    		•  2.51581622888695 bayes_pls_golite062009
  • transcription activator activity
    		•  1.25487495162413 bayes_pls_golite062009
  • transcription factor binding
    		•  1.15204005455906 bayes_pls_golite062009
  • transcription coactivator activity
    		•  1.1297723528047 bayes_pls_golite062009
  • protein binding
    		•  1.07873333188144 bayes_pls_golite062009
  • transcription cofactor activity
    		•  1.01502031330902 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.72554769377984 bayes_pls_golite062009
  • transcription initiation factor activity
    		•  0.0945459819298291 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0852726470007639 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.0736756545988504 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle