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Protein Overview: OTUD6A

General Information:
Name(s) found: OTUD6A [HGNC (HUGO)]
Description(s) found:
Found 34 descriptions.
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  • OTU domain containing 6A [HGNC (HUGO)]
    • Organism: Homo sapiens
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDPKSEQQR ILRRHQRERQ ELQAQIRSLK NSVPKTDKTK RKQLLQDVAR MEAEMAQKHR  60
   61 QELEKFQDDS SIESVVEDLA KMNLENRPPR SSKAHRKRER MESEERERQE SIFQAEMSEH 120
  121 LAGFKREEEE KLAAILGARG LEMKAIPADG HCMYRAIQDQ LVFSVSVEML RCRTASYMKK 180
  181 HVDEFLPFFS NPETSDSFGY DDFMIYCDNI VRTTAWGGQL ELRALSHVLK TPIEVIQADS 240
  241 PTLIIGEEYV KKPIILVYLR YAYSLGEHYN SVTPLEAGAA GGVLPRLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] FFAS03 1.1 crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
    2 View Details [123..288] PSI-BLAST 4.0 Structure of Otubain-2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  3.40148357876466 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.21949433847862 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  2.71117522993364 bayes_pls_golite062009
  • hydrolase activity
    		•  2.29464693834116 bayes_pls_golite062009
  • endopeptidase activity
    		•  2.26699762664334 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
    		•  1.95802900199539 bayes_pls_golite062009
  • catalytic activity
    		•  1.05972260874031 bayes_pls_golite062009
  • binding
    		•  0.586727415287325 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
    		•  0.500110970732392 bayes_pls_golite062009
  • protein binding
    		•  0.130065210618838 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  0.0101379718864654 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle