| Protein: | OTUD6A |
| Organism: | Homo sapiens |
| Length: | 288 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OTUD6A.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-87 | [1..287] | [1..287] |
|
|
5.0E-79 | [1..280] | [36..320] |
|
|
7.0E-78 | [13..280] | [115..387] |
|
|
6.0E-77 | [1..280] | [5..289] |
|
|
3.0E-76 | [1..287] | [1..289] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MDDPKSEQQR ILRRHQRERQ ELQAQIRSLK NSVPKTDKTK RKQLLQDVAR MEAEMAQKHR 60
61 QELEKFQDDS SIESVVEDLA KMNLENRPPR SSKAHRKRER MESEERERQE SIFQAEMSEH 120
121 LA
|
| Detection Method: |  |
| Confidence: | 1.1 |
| Match: | 1rh1A |
| Description: | crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [123-288] |
1 11 21 31 41 51
| | | | | |
1 GFKREEEEKL AAILGARGLE MKAIPADGHC MYRAIQDQLV FSVSVEMLRC RTASYMKKHV 60
61 DEFLPFFSNP ETSDSFGYDD FMIYCDNIVR TTAWGGQLEL RALSHVLKTP IEVIQADSPT 120
121 LIIGEEYVKK PIILVYLRYA YSLGEHYNSV TPLEAGAAGG VLPRLL
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 3.40148357876466 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.21949433847862 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 2.71117522993364 | bayes_pls_golite062009 |
| hydrolase activity | 2.29464693834116 | bayes_pls_golite062009 |
| endopeptidase activity | 2.26699762664334 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| binding | 0.586727415287325 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.500110970732392 | bayes_pls_golite062009 |
| protein binding | 0.130065210618838 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.0101379718864654 | bayes_pls_golite062009 |
