Protein Overview: gi|134034966, gi...

General Information:
Name(s) found:	gi\|2133196 [NCBI NR] gi\|134034966 [NCBI NR]
Description(s) found: SHOW ONLY BEST	pir\|\|S69842 TyB protein - yeast (Saccharomyces cerevisiae) retrotransposon Ty3.GR [NCBI NR] gi\|134034966\|sp\|Q99315.3\|YG31B_YEAST RecName: Full=Transposon Ty3-G Gag-Pol polyprotein; AltName: Full=Gag3-Pol3; AltName: Full=Transposon Ty3-1 TYA-TYB polyprotein; Contains: RecName: Full=Capsid protein; Short=CA; AltName: Full=p24; Contains: RecName: F [NCBI NR] Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3 [Swiss-Prot] TY3B TY3B protein [mips] - TY3B - TY3B protein [mips] >Q99315 (Q99315) Chromosome VII reading frame ORF YGR110W [4932.FASTACCERV.txt] TyB protein - yeast (Saccharomyces cerevisiae) retrotransposon Ty3.GR [nrdb_11152004_Chlamydomonas] Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
Organism:	Saccharomyces cerevisiae
Length:	1547 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] cytoplasm [IEA] retrotransposon nucleocapsid [ISS]
Biological Process:	transposition, RNA-mediated [ISS] DNA integration [IEA] DNA recombination [IEA] RNA-dependent DNA replication [IEA] viral procapsid maturation [IEA]
Molecular Function:	nucleotidyltransferase activity [IEA] zinc ion binding [IEA] aspartic-type endopeptidase activity [IEA] ribonuclease activity [ISS] peptidase activity [IEA][ISS] nucleotide binding [IEA] nucleic acid binding [IEA] DNA binding [IEA] ribonuclease H activity [IEA] ATP binding [IEA] DNA-directed DNA polymerase activity [IEA][ISS] RNA-directed DNA polymerase activity [IEA][ISS] RNA binding [IEA][ISS] protein binding [ISS] metal ion binding [IEA] catalytic activity [IEA] endonuclease activity [IEA] nuclease activity [IEA] transferase activity [IEA] hydrolase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMDQIPGG GNYPKLPVEC LPNFPIQPSL TFRGRNDSHK LKNFISEIML NMSMISWPND  60
   61 ASRIVYCRRH LLNPAAQWAN DFVQEQGILE ITFDTFIQGL YQHFYKPPDI NKIFNAITQL 120
  121 SEAKLGIERL NQRFRKIWDR MPPDFMTEKA AIMTYTRLLT KETYNIVRMH KPETLKDAME 180
  181 EAYQTTALTE RFFPGFELDA DGDTIIGATT HLQEEYDSDY DSEDNLTQNG YVHTVRTRRS 240
  241 YNKPMSNHRN RRNNNPSREE CIKNRLCFYC KKEGHRLNEC RARKAVLTDL ELESKDQQTP 300
  301 FIKTLPIVHY IAIPEMDNTA EKTIKIQNTK VKTLFDSGSP TSFIRRDIVE LLKYEIYETP 360
  361 PLRFRGFVAT KSAVTSEAVT IDLKINDLHI TLAAYILDNM DYQLLIGNPI LRRYPKILHT 420
  421 VLNTRESPDS LKPKTYRSET VNNVRTYSAG NRGNPRNIKL SFAPTILEAT DPKSAGNRGD 480
  481 SRTKTLSLAT TTPAAIDPLT TLDNPGSTQS TFAQFPIPEE ASILEEDGKY SNVVSTIQSV 540
  541 EPNATDHSNK DTFCTLPVWL QQKYREIIRN DLPPRPADIN NIPVKHDIEI KPGARLPRLQ 600
  601 PYHVTEKNEQ EINKIVQKLL DNKFIVPSKS PCSSPVVLVP KKDGTFRLCV DYRTLNKATI 660
  661 SDPFPLPRID NLLSRIGNAQ IFTTLDLHSG YHQIPMEPKD RYKTAFVTPS GKYEYTVMPF 720
  721 GLVNAPSTFA RYMADTFRDL RFVNVYLDDI LIFSESPEEH WKHLDTVLER LKNENLIVKK 780
  781 KKCKFASEET EFLGYSIGIQ KIAPLQHKCA AIRDFPTPKT VKQAQRFLGM INYYRRFIPN 840
  841 CSKIAQPIQL FICDKSQWTE KQDKAIDKLK DALCNSPVLV PFNNKANYRL TTDASKDGIG 900
  901 AVLEEVDNKN KLVGVVGYFS KSLESAQKNY PAGELELLGI IKALHHFRYM LHGKHFTLRT 960
  961 DHISLLSLQN KNEPARRVQR WLDDLATYDF TLEYLAGPKN VVADAISRAV YTITPETSRP1020
 1021 IDTESWKSYY KSDPLCSAVL IHMKELTQHN VTPEDMSAFR SYQKKLELSE TFRKNYSLED1080
 1081 EMIYYQDRLV VPIKQQNAVM RLYHDHTLFG GHFGVTVTLA KISPIYYWPK LQHSIIQYIR1140
 1141 TCVQCQLIKS HRPRLHGLLQ PLPIAEGRWL DISMDFVTGL PPTSNNLNMI LVVVDRFSKR1200
 1201 AHFIATRKTL DATQLIDLLF RYIFSYHGFP RTITSDRDVR MTADKYQELT KRLGIKSTMS1260
 1261 SANHPQTDGQ SERTIQTLNR LLRAYASTNI QNWHVYLPQI EFVYNSTPTR TLGKSPFEID1320
 1321 LGYLPNTPAI KSDDEVNARS FTAVELAKHL KALTIQTKEQ LEHAQIEMET NNNQRRKPLL1380
 1381 LNIGDHVLVH RDAYFKKGAY MKVQQIYVGP FRVVKKINDN AYELDLNSHK KKHRVINVQF1440
 1441 LKKFVYRPDA YPKNKPISST ERIKRAHEVT ALIGIDTTHK TYLCHMQDVD PTLSVEYSEA1500
 1501 EFCQIPERTR RSILANFRQL YETQDNPERE EDVVSQNEIC QYDNTSP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|134034966, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: