YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TSR2

General Information:
Name(s) found: TSR2 / YLR435W [SGD]
Description(s) found:
SHOW ONLY BEST
  • gi|84029602|sp|Q06672.2|TSR2_YEAST RecName: Full=Pre-rRNA-processing protein TSR2; AltName: Full=20S rRNA accumulation protein 2 [NCBI NR]
  • gi|37362680|ref|NP_013539.2| Protein with a potential role in pre-rRNA processing; Tsr2p [Saccharomyces cerevisiae] [NCBI NR]
  • Pre-rRNA-processing protein TSR2 OS=Saccharomyces cerevisiae GN=TSR2 PE=1 SV=2 [Swiss-Prot]
  • TSR2 Twenty S rRNA accumulation protein [mips]
  • Protein with a potential role in pre-rRNA processing [SGD]
  • Chr XII from 1006373-1006990 [yeastorf5.fasta]
  • TSR2 SGDID:S0004427, Chr XII from 1006374-1006991, Verified ORF [yeastflysequest.fasta]
  • Protein with a potential role in pre-rRNA processing [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas]
  • TSR2 SGDID:S000004427, Chr XII from 1006374-1006991, Verified ORF, "Protein with a potential role in pre-rRNA processing" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • TSR2 SGDID:S000004427, Chr XII from 1006375-1006992, Verified ORF, "Protein with a potential role in pre-rRNA processing" [yeast-contam.fasta]
  • Protein with a potential role in pre-rRNA processing; Tsr2p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Pre-rRNA-processing protein TSR2 (20S rRNA accumulation protein 2) [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Pre-rRNA-processing protein TSR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TSR2 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • TSR2 SGDID:S000004427, Chr XII from 1006378-1006995, Genome Release 64-1-1, Verified ORF, "Protein with a potential role in pre-rRNA processing" [yeast-030211-contam.fasta]
  • TSR2 SGDID:S000004427, Chr XII from 1006378-1006995, Genome Release 64-2-1, Verified ORF, "Protein with a potential role in pre-rRNA processing" [20141208_orf_trans.fasta]
  • YLR435W SGDID:S000004427, Chr XII from 1006378-1006995, Genome Release 64-1-1, Verified ORF, "Protein with a potential role in pre-rRNA processing" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 205 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: maturation of SSU-rRNA [IMPLink to PubMed article]
    ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTQYIDETA FVQAEQGKTN LMFSDEKQQA RFELGVSMVI YKWDALDVAV ENSWGGPDSA  60
   61 EKRDWITGIV VDLFKNEKVV DAALIEETLL YAMIDEFETN VEDDSALPIA VEVINIYNDC 120
  121 FNLNYNKVEK LYLEWQEKQR TKKSKRVVHI EGDDDEDDED VEDYDDEDED EEMDEVVPDL 180
  181 VSSKPEPIVD EDGFELVQPK GRRKH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) RPS26B TSR2
    View Details Krogan NJ, et al. (2006) RIO2 RPS26B TSR2
    View Details Qiu et al. (2008) BRX1 NSA2 RPL38 TSR2

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RAD51 TSR2 1 Unpublished Fields Lab Data
    View Screen CDC23 TSR2 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data TSR2 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] MSA 2.021974 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle