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Protein Overview: YPR097W

General Information:
Name(s) found: YPR097W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Protein that contains a Phox homology (PX) domain and binds phosphoinositides; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1073 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: phosphoinositide binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITQDTPALN PTEEHYLKRE LLRCQLDYEI GKLNDQFALR KFGYPFSPND PTAPQPISNN  60
   61 DSSPVLGGKG HFSVNYPMLS YVLQEFISTF PLLSTNLLVD EKFWQSKVQV FFEHFMSLGF 120
  121 SESYDREEAS KRKKVSKKLS KVILLLFNSG VGSFQEQAYY NEDKFVLQSG QARKRSNIEK 180
  181 FAMPTRENLE NLLTNESVFI NGWDVNIISV FNKNSRKCTE SVDNDKSSKS TPTSSPKSHA 240
  241 IKSFASTSKW MKNAFNNTIN STINSMPESS ASLFSKLSLG VPSTKSKQSR KHHYFLIKIK 300
  301 KQDDDDQDNS NEENSNLDHH AGYFYVTRTY SDFKKLSHDL KSEFPGKKCP RLPHRNKKVT 360
  361 SMITKTEVLH NGQTKSAARE KIVNTFDTDL QSASESDNSS FLQTTNELSA TETVLTEKET 420
  421 ETLRKNILNE IKEEDNIDED EYEEEGEGEE SDFDEYKDAS DSKINTLVGE KMRTSLRQYL 480
  481 RTLCKDAEVS QSSSIRRFFL SGPNLDIKDI NPKIADDIRN RALIDVSNLE NQIRFQQMAL 540
  541 EKSLKLQDSM KDFKTSLLKD EKYLMSLLVE IKDNTKVEDL SPLLQDFVEW CKIYISSMIY 600
  601 QMFLGNDNSY ELYTQIRRLH KLMPYTVMGQ IMKFTNPIAI MRGMIELFMA QPFGGHSLLQ 660
  661 TMFSTILTDD LKTQKVAIKE LERKIAEMDP GASVVTKCLK DFVFNNDTKD EHDTKLFTMD 720
  721 AVNAESESMN MPVPLIVLMK SAAANLIPDE VVAGLIESYS SWKLQKEDTD ALNVTSEDQS 780
  781 GIYFTHVKDL WQLYIKEHDK QLMRQLWQDP ELTQMLKAIV TMIYEPMVKI FKVARMDVAL 840
  841 KNFEKFMGDL IRLVDDVING QLGVSTQFDV VEEIHNLVTK HQDAFFEFIH DVYLNDSEGI 900
  901 FEGFITWITT IVKFLQKSKF GGPSERIDFN KLICRDDIDI DVKLLKVQVN NVLNKKIGAR 960
  961 KIYKKLLDLK VKQGTKQNNK HAAGILQKNW SDINSLVMPS SSGSFGLGDG DLVDLDLDTG1020
 1021 DYDFLHKENE VELEKQYKDL LNLVVDESEI DKLRSQVFAQ ELKNYLEAQI AKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YPR097W PRP11 2 Unpublished Fields Lab Data
    View Screen YPR097W HMO1 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YPR097W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] deduced N/A No confident structure predictions are available.
    2 View Details [233..504] Pfam 20.60206 PX domain No confident structure predictions are available.
    3 View Details [505..917] MSA 1.004919 View MSA. No confident structure predictions are available.
    4 View Details [918..1073] deduced N/A No confident structure predictions are available.
    5 View Details [563..771] deduced N/A No confident structure predictions are available.
    6 View Details [772..1073] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  2.50016763213274 bayes_pls_golite062009
  • protein binding
    		•  1.67421332231525 bayes_pls_golite062009
  • catalytic activity
    		•  0.144334987824229 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle