Protein Overview: YPR078C

General Information:
Name(s) found:	YPR078C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|74676423\|sp\|Q06813.1\|YP078_YEAST RecName: Full=Uncharacterized protein YPR078C [NCBI NR] gi\|6325335\|ref\|NP_015403.1\| Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible; Ypr078cp [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S69064 hypothetical protein YPR078c - yeast (Saccharomyces cerevisiae) [NCBI NR] gi\|1230684\|gb\|AAB68127.1\| Ypr078cp [Saccharomyces cerevisiae] [NCBI NR] Uncharacterized protein YPR078C OS=Saccharomyces cerevisiae GN=YPR078C PE=2 SV=1 [Swiss-Prot] Conserved hypothetical protein [mips] Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible [SGD] >Q06813 (Q06813) Chromosome XVI COSMID 9513 [4932.FASTACCERV.txt] Chr XVI from 698260-697142, reverse complement [hmr_yeast5_DM3-1_pombe.fasta] Chr XVI from 697142-698260, reverse complement [yeastorf3.fasta] YPR078C, Chr XVI from 697142-698260, reverse complement [yeast_orfs2] YPR078C SGDID:S0006282, Chr XVI from 698260-697142, reverse complement, Uncharacterized ORF [yeastflysequest.fasta] YPR078C SGDID:S0006282, Chr XVI from 698262-697144, reverse complement, Uncharacterized ORF [10112005cervSGD.fasta] Ypr078cp [Saccharomyces cerevisiae]gi\|6325335\|ref\|NP_015403.1\| Ypr078cp [Saccharomyces cerevisiae]gi\|2132266\|pir\|\|S69064 hypothetical protein YPR078c - yeast (Saccharomyces cerevisiae) [nrdb_11152004_Chlamydomonas] (Q06813) Ypr078cp [cerv4932.FASTAC] YPR078C SGDID:S000006282, Chr XVI from 698262-697144, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] YPR078C SGDID:S000006282, Chr XVI from 698262-697144, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta] hypothetical protein; Ypr078cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Ypr078cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta] [chemostatdb.fasta] Uncharacterized protein YPR078C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR078C PE=2 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] YPR078C SGDID:S000006282, Chr XVI from 698265-697147, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible" [yeast-030211-contam.fasta] Uncharacterized protein YPR078C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR078C PE=4 SV=1 [YEAST.fasta.20131015] YPR078C SGDID:S000006282, Chr XVI from 698265-697147, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible" [20141208_orf_trans.fasta]
Organism:	Saccharomyces cerevisiae
Length:	372 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	DNA metabolic process [IGI] meiosis [IEP]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTISGVLPT VLSPSELRSD DERTFQFDEE AEITTHLTES EDLRRLINET AQLGVRVDHI  60
   61 HDKTDQEIAR LEKVIKEVTE SDTFFRSCSG WFKTNKNFSD SESSSNTQLK SLSQLHGRYD 120
  121 RDWRQRLNKW FRKNKSKLAL PSDNNLEEVN DDKVYGYGED LMERGKTPYF SDIDDFMNGL 180
  181 NIISPLTPDD FENDDTLVKI DETCQIHSAS EPEKTSISPT FGKNIKKELV TDDTESIISG 240
  241 PPLQENKKTL LKYRYVRTSL DMLGSEKSSS KNNSGGMFRI FHKSANFGDK NQENVPRVWD 300
  301 TLRNNLGREI YLLQGRFKKW TTKHQNLKKG QPCKDEDAVT VPLPSSDPGK ETQLETKLCF 360
  361 VPEPGDQPLV QA

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		GSG1 YPR078C

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	MLP2	#32 Asynchronous Prep-No Phosphopeptide enrichment	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	MDM30	YPR078C	2	Uetz P, et al. (2000)
View Screen	BEM1	YPR078C	1	Unpublished Fields Lab Data
View Screen	CUS1	YPR078C	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..372]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.69

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2