Protein Overview: YPR078C

General Information:
Name(s) found:	YPR078C [SGD]
Description(s) found: Found 24 descriptions. SHOW ALL	Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible [SGD]
Organism:	Saccharomyces cerevisiae
Length:	372 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	DNA metabolic process [IGI] meiosis [IEP]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTISGVLPT VLSPSELRSD DERTFQFDEE AEITTHLTES EDLRRLINET AQLGVRVDHI  60
   61 HDKTDQEIAR LEKVIKEVTE SDTFFRSCSG WFKTNKNFSD SESSSNTQLK SLSQLHGRYD 120
  121 RDWRQRLNKW FRKNKSKLAL PSDNNLEEVN DDKVYGYGED LMERGKTPYF SDIDDFMNGL 180
  181 NIISPLTPDD FENDDTLVKI DETCQIHSAS EPEKTSISPT FGKNIKKELV TDDTESIISG 240
  241 PPLQENKKTL LKYRYVRTSL DMLGSEKSSS KNNSGGMFRI FHKSANFGDK NQENVPRVWD 300
  301 TLRNNLGREI YLLQGRFKKW TTKHQNLKKG QPCKDEDAVT VPLPSSDPGK ETQLETKLCF 360
  361 VPEPGDQPLV QA

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		GSG1 YPR078C

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	MLP2	#32 Asynchronous Prep-No Phosphopeptide enrichment	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	MDM30	YPR078C	2	Uetz P, et al. (2000)

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..372]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.69

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2