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Protein Overview: YPR022C

General Information:
Name(s) found: YPR022C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1133 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGKELAGRL RKRENDNDLS PNSSSSPAER FRCPHPECNK TFSRQEHLSR HKLNHWPKEI  60
   61 YVCSYVLPTT NAPCNKTFVR KDLLIRHEKR HSKVKNRLSR PSKDQISSSN KDFSKNAPYN 120
  121 PSEVPLSTQS GTSTINLIKN SVNPPPSITQ ESKFRPFLQQ AQQPQQVQQS QQPQQIQQLQ 180
  181 QLQFPQQLRA PLQQPMLQQQ MHPQQASPTF PSYDPRIRNN GQNGNQFFNL IFDNRTGVNG 240
  241 FEVDAANNNG NGNDQNMNIN PAVQQQRYQD RNFASSSYQQ PLQPLTQDQQ QEQYFQQQKL 300
  301 AQQQQQQQQQ QQQQQQLPPQ NPFGDPLTSS SSGANLSVMQ DLFSTNFLNS DPLQSFMQEL 360
  361 SEAPQVSIED TFSDKNTIPP NEKPVQQDEG FQNPPVMFEL PQDNIKIPKA QPKFNDNPST 420
  421 SVKDNLSSQK LNINELKRRS SKDSGVGNNS SLNYKEQLRH SMKSVPSFFH PDPLTKYKIS 480
  481 KEKCQEMFSF VPELRYVSIE SIHKSLKSFW LNFHPQYGLL HKPSFHVDKQ PAILNLALIM 540
  541 TGASFLGSEY REQISDPICG PLRWIIFSHA DFQPPSKTYI IQSLLLVEGY EKTSTNRYLH 600
  601 ERSFLHHGTT IQLLRRTPSL GGHPLMVKTG KTSGENSIQD PQEVYKRWID FEMLKRIAFY 660
  661 AFYMDTTHAV VFGYWNLFIN SNQIQLTLPC PDQVWESYDL SYETLMEHGY GSTKRDENNT 720
  721 FLSALMQLMK NVIQILRNNN IRRNKVNNGG IESTPTDLES TTDWNIQSLF GKKILLAGII 780
  781 SILFQCQEEV NGDYFITNFR GGITDHLGLS WKDILSFAMN YWLHEVQKSC TDPKACRIST 840
  841 PSEETLTNRK IDEDNGDGLC DDDLDLLSSD NPSNCKIPVI HISQIVLRIL HHDYYIYAGA 900
  901 PWRMNVPIGR DEYDMISRRI LQFAKDPYNG GVAVVYAFQF LFEMFIIKEN NVPTVVKSYN 960
  961 INSDPVITRP YAIALTSLLI WSCNFALHGC EVSIWDNTEA SKDECFQPDD SNGGNILGNT1020
 1021 DNNGSTIANN NLKEKNNYIP IESFEVYLLR MYRNLYVDSS LDVVSFQNDV WAKASLLQHI1080
 1081 SNTHFLCGMM QFMRDIFNKS YWDLGREFGK LFDNCLERSL GKTSPTCHNM FDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CAB3 No Comments Hazbun TR, et al. (2003)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen IPI3 YPR022C 2 Hazbun TR, et al. (2003)

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YPR022C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] PSI-BLAST 68.68867 ADR1
    2 View Details [96..370] MSA 4.328987 View MSA. No confident structure predictions are available.
    3 View Details [371..471] deduced N/A No confident structure predictions are available.
    4 View Details [472..995] MSA 1.010994 View MSA. No confident structure predictions are available.
    5 View Details [996..1133] deduced N/A Confident ab initio structure predictions are available.
    6 View Details [630..854] deduced N/A No confident structure predictions are available.
    7 View Details [855..997] deduced N/A No confident structure predictions are available.
    8 View Details [998..1133] deduced N/A Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle