YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YOR296W

General Information:
Name(s) found: YOR296W [SGD]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; expressed during copper starvation; YOR296W is not an essential gene [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 1289 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTVSTLSS TVSDVSVEIP SICNVINTEL PTSDVYLYTL KLILLDYINE PRFKEAALLS  60
   61 NRTGTSRVLS DKTNHQQTQH GKKLVVDKQD DMSERDIVQA TLRILKGKLA QISGNKNLAP 120
  121 NEMHWKSIVK MYYSMLDSSS ADTFSKMGQM EEVVGYFTNI ASNELKKMTI KNSRDELFSE 180
  181 VAYFIDLVID VLPDSCANII KRLLDYKINL KKGETTVKKK RAASPATVPQ YRSISGSTIS 240
  241 NKQPSFKVQD ISHMKYFMQL FETDETKLHQ DVMAVKDDCT NPIFCGELRY LRKKIKKDNG 300
  301 TLTASDFSSD REYNLWKNYE LLEIANLMDR FEIGEKVTSH GNRLIPKDAK SVFVRLIGLV 360
  361 LKKECSNAVN AINLSQEALF FFHKSARYWR IEYPSTISSL VYSAANLSVL GDEELNIPIT 420
  421 ENLFSVIRNK YLCSEDNLDP SAWNAQDRYL WAANLFHTTD QSMRTINNLL TAIFSGTKPK 480
  481 FSPVLSFYYS NIVGDPVMEF YETQSVAVKK YWIKLFKKTL FKASEDYFVS LLQDMLKANA 540
  541 IEIQNVQNLV ETIIEAIKAI QKRYNKPLLD EISLPRQCAV FLCEVYGSDS LNLIKTAEKS 600
  601 TMKMTGQKLG PIDALDMYDV LKELRQIYLQ VKPKGKFFFN LENYFIKYLT RLCDDVSRNV 660
  661 QKVIKSSLES ENWQPVNDQD HFSRSVLDIF KMINESTSML EKFGWQNEFQ LAQMITVILK 720
  721 AFSDGMLSYS AQLMELIQRD LQEGDEPSYS LESSDTRSSL SLNNANVNHE KSRSSRLFED 780
  781 LKNVVKSTPK MVAPAPYQFK KRTCVLLNDL DKTLFLLESF EEKADPSKIS SVIAQYHSSH 840
  841 NLEDNGKSFD DQNMKQVYTL RIIGAENIKG FSKTGLSNTY VSMRNITLQR EIGTTKIVAR 900
  901 SITPKWDEEF VFESPFGKSN DIMFTIWHHP HSRLKNLAED DLCGKANMKF TPRKLKDDGF 960
  961 PIDFSLTLNP QGTLYCQISL ESEKIDAVSS MGRIYRSFSR SRDRAINLIV NKFSDFIAFA1020
 1021 FSRTTLKTVC GHHGSALASD EAVYDAILPL FDYLNANLNI LASELSQRLL FMVMLRAWNL1080
 1081 VLENADLLLL PALNSAKVNI LRSAKKSLWE NTLSTTKTVS GYGRPLTQAE IEAVFKWLDA1140
 1141 LCVDFFHNKG EGPPLAELKN EYYQNILLIP AFYDKSVSEL KDEVQRLIPL YEEYLRWFYL1200
 1201 KKTPITFTNK SAGTISRKKS LVANIVKEPK EQLERDAEVM NIILRILIAK GQHDYVHRIL1260
 1261 HDRKELVNTM KNRRAVSRAV TPTGKKGRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YOR296W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] deduced N/A No confident structure predictions are available.
    2 View Details [225..255]
    [456..720]    		 ORFEUS 8.29 (+)-bornyl diphosphate synthase
    3 View Details [256..276]
    [290..306]
    [413..455]    		 ORFEUS 8.29 (+)-bornyl diphosphate synthase
    4 View Details [277..289]
    [307..412]    		 ORFEUS 8.29 (+)-bornyl diphosphate synthase
    5 View Details [721..838] PSI-BLAST 52.522879 Synaptogamin I
    6 View Details [839..1032] PSI-BLAST 52.522879 Synaptogamin I
    7 View Details [1033..1289] deduced N/A No confident structure predictions are available.
    8 View Details [1175..1289] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle