| General Information: |
|
| Name(s) found: |
VPS27 /
YNR006W
[SGD]
|
| Description(s) found:
Found 23 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 622 amino acids |
Gene Ontology: |
|
| Cellular Component: |
endosome
[IDA ]
|
| Biological Process: |
protein targeting
[TAS]
protein retention in Golgi apparatus [IMP ]
endosome transport [IMP ]
|
| Molecular Function: |
protein binding
[IDA]
phosphatidylinositol-3-phosphate binding [IDA ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSVSTPSELD ALIEQATSES IPNGDLDLPI ALEISDVLRS RRVNPKDSMR CIKKRILNTA 60
61 DNPNTQLSSW KLTNICVKNG GTPFIKEICS REFMDTMEHV ILREDSNEEL SELVKTILYE 120
121 LYVAFKNDSQ LNYVAKVYDK LISRGIKFPE KLTLSNSPTA MFDSKTPADW IDSDACMICS 180
181 KKFSLLNRKH HCRSCGGVFC QEHSSNSIPL PDLGIYEPVR VCDSCFEDYD LKRHDDSKKS 240
241 KKHRHKRKKD RDYSTPEDEE ELIRKAIELS LKESRNSASS EPIVPVVESK NEVKRQEIEE 300
301 EEDPDLKAAI QESLREAEEA KLRSERQKAS RQMQPQQPSP QPQPIHSVDL SDEEKDSIYM 360
361 FASLVEKMKS RPLNEILEDS KLQNLAQRVF ASKARLNYAL NDKAQKYNTL IEMNGKISEI 420
421 MNIYDRLLEQ QLQSINLSQQ YTLPQVPSDP YNYLTENVQN PAESYQTPPL QQLSSHQYKP 480
481 QQDVSRQQSV KANSSPTTNI DHLKTIDVTP HAQQKPQSHV ELAPSDPPYP KEEAEDEGTQ 540
541 AVQDEESSTQ ESRERPYPVE TENGETSINK RPQGITRYDF PTVPARKFVQ PESTVPLPAS 600
601 SSEIPIKEER PPSPQEELLI EL |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
HSE1 VPS27 |
| View Details | Krogan NJ, et al. (2006) |
|
HSE1 VPS27 |
| View Details | Gavin AC, et al. (2006) |
|
HSE1 VPS27 |
| View Details | Gavin AC, et al. (2002) |
|
HSE1 VPS27 |
| View Details | Qiu et al. (2008) |
|
DID4 VPS27 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Schneider, DA, et al. (2006) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..146] |  |
9.55 | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
| 2 | View Details | [147..243] | |
401.69897 | vps27p protein |
| 3 | View Details | [244..356] | |
N/A | No confident structure predictions are available. |
| 4 | View Details | [357..622] | |
14.12 | No description for 1ldvA was found. |
Functions predicted (by domain):
| # | Gene Ontology predictions | ||||||
| 1 |
|
||||||
| 2 | No functions predicted. | ||||||
| 3 | No functions predicted. | ||||||
| 4 | No functions predicted. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)