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Protein Overview: RIT1

General Information:
Name(s) found: RIT1 / YMR283C [SGD]
Description(s) found:
Found 24 descriptions.
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  • 2'-O-ribosyl phosphate transferase, modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: charged-tRNA amino acid modification [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: transferase activity, transferring pentosyl groups [IDALink to PubMed article][IGILink to PubMed article][IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRLSKRYR SRVQFSISVM DENIYLSLSQ INKDIRKENK SVRNRLQSIL LDNKFLQDRV  60
   61 IPIFPHYPLI PNERCGLWYC NPSSFKQTSY FKSTDGHVNQ WDFSTRRLNF HLLETIRDNK 120
  121 GIIIVDSTRR GKKIPDALSK TVPIWCAVLN TLMLQETEKN VAIDKVLYLP PETVPKSEYD 180
  181 MIKRKIPELV AKLQKLNIID SKKLNELFMG KLLRPIWVHP GSSLLDHSVD YFTGEVQEYE 240
  241 AWETPEDQNI IPIILCTVSY QAQDGMDKRY GFTYVQGAAD DHELWSFGLD SNMFWAHIEY 300
  301 LGDASYSDDQ LHDYIMDLAA AKLRNQCYIQ DKGSLDEVFG NIDKITNEIS LGKVSSGLTI 360
  361 NKNLKQKLKS EYGKVIIFSN SVTVAEDTDD EEESGTDPFI SIYKLQSGDK KSSKALRSTF 420
  421 PRIHGEIQSL FTNRDEKIKP MLICCNTGTD MSIGVILSIL CTKYTEEWML TSELPDISKL 480
  481 IVRKHLTKLI SHLKGRNVNP SRATLNSVNS FLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data RIT1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] MSA 1.004896 View MSA. No confident structure predictions are available.
    2 View Details [325..513] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle