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Protein Overview: YMR124W

General Information:
Name(s) found: YMR124W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Protein of unknown function; GFP-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; interacts with Crm1p in two-hybrid assay; YMR124W is not an essential gene; predicted to have a role in organelle organization [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 943 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAGLSTMAT RNGQSSARVK LRNNLLNNDI GNIDIRDETP ISRNGNDSNI NIQPSSVPQQ  60
   61 QQQQQQYYRN GMNEAPIQAP LQQRQIPMQN YSQQQRQQQQ YNFEYSNPHM NEIPLMQHNF 120
  121 TKPSLSNNRD NVNGKKASSF TQSSFSNFFK HKHQFGKSKK NTKGTGGGGD GDDDDEVILD 180
  181 DSANSDLTFN DIQTFGHKGG DKYGYGGDST PIIPTLVTKD RGNMSNTEYR KYITNQRKTA 240
  241 MNAMAKQTKN GTLASLPPRA MSLQSFPNGN PLMQAPTPHP RFQPNKMVSA NYSRSNSLMS 300
  301 GPPGQFRQPQ QQRMLPMNNY NNHPGQFQNT PPVMPSGQQP PQQPRTLSLT NGPRYSPQNP 360
  361 RPFAGHQQIS QRQQQQQQQL QLHPMSEGYR TMSLQSQNVP QGFNPWSPND NDRKAVSMKQ 420
  421 PISQSSISSK NNSAYSIPNV QNNSLTTFSP SSPTDATAMP NSTKQGSSPL KKQVNIDQPI 480
  481 ENKGKLNVLQ LSTPQQNELK EKERKLAEME KSLREREALV EEKEKERAEK NTEANEEEEI 540
  541 SHESDDLNLR PASALETGLK DLKLESESAV ANRASLSTFS STFSDSPSKQ RIINTRTGMY 600
  601 KLENSTDINE YVTAQEFPSP GKYNSNSDNG EMNTTNEVDF DFNTSKRASL LQSIPERDPK 660
  661 RNVSDATIKR RESDGNGRRL SNVNISMNQE NINNDTFLYK KNNRDGHLSA VSHMSSSSRR 720
  721 SFISNTLPLN IDSASESDNF VPHMDGSPSK TKSAPVSYDK DGMNASEEDF SFDNTLAKPY 780
  781 EPLYARRGDI TSAGSTSGED SSQPKMITIS GEQLNLITEN KELMNELTLV STELAESIKR 840
  841 ETELEERIRL YETNNSAPSF DDSSSVSFSD FEKELRKKSS KIVQLIQQLN DERLKRFIAE 900
  901 EQLLLQENGT KPSSMELVGR IENLNKLIDE RDSEIEMLKG RLQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) ECM1 YMR124W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YMR124W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] deduced N/A No confident structure predictions are available.
    2 View Details [172..281] ab initio 13.64 No description for 1ldvA was found.
    3 View Details [282..455] ab initio 10.16 No description for 1ivoA was found.
    4 View Details [456..855] ab initio 10.16 No description for 1ivoA was found.
    5 View Details [856..943] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle