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Protein Overview: YMR010W

General Information:
Name(s) found: YMR010W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR010W is not an essential gene; YMR010W mRNA is transcribed with ADI1 [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 405 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: metabolic process [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTGPLDAT LIRDVAVATA TKASYDMSDT LYSYLPKVDQ FYIPEWLTMQ FIANNLISFT  60
   61 PLFSYGTTII SIEKCKTALG FSIDICATML IASILRISYY LITPYEITLL RQSLVMIFIQ 120
  121 LILLRTSLKY RPDEYKYQNL TDVESLSHLI HDIWFEFFSC INRPKFLSED WKNLIKSLSF 180
  181 TNLLKFSFKI FLAFFYKILK FFDPNFKRIG AFWQWDDDKN FWRFLALFAT VQILVTFFIS 240
  241 NILNWDSLAQ GLGSIIGSLG LLVESLLPLP QIAILYKLKS VQGFKLILLV SWLCGDTLKI 300
  301 TYLIFGAKNI SALFVIFALF QMSLDFYIGG QYIYYRYYYP KLRHQHHPND SNSPSDEDES 360
  361 EMYELDLFNT LQKDVEKALK QDSNDTSDSP QDDQVGKSQA QAVTL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) KIN4 YMR010W
    View Details Qiu et al. (2008) VRG4 YMR010W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YMR010W Huh WK, et al. (2003)
    View Data YMR010W and COP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] MSA 2.025974 View MSA. Confident ab initio structure predictions are available.
    2 View Details [168..243] deduced N/A No confident structure predictions are available.
    3 View Details [244..405] MSA 5.027996 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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