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Protein Overview: NMD4

General Information:
Name(s) found: NMD4 / YLR363C [SGD]
Description(s) found:
Found 30 descriptions.
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  • Protein interacting with Nam7p, may be involved in the nonsense-mediated mRNA decay pathway [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IPILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQYNFIIDA SAFEKGLGNI KRWCSDCTEA VTLNFYIPTF TLNELDFLQQ RRKSFAARES  60
   61 LKFIDRLDDS KFANLKVFIE FPEVLDIILW SDVMEHNDSS GKINIAKLPK RLKNLLKSCI 120
  121 YKCYLEGNEG LHWFLISEDP QIREMAMQCN IPSCSIVDVD SILSKDMNDK SFRESEKFNN 180
  181 MMLKNGTKEE SENGREIIRT NFNKTVYASR GTGELWSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data NMD4 Huh WK, et al. (2003)

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle