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Protein Overview: PBA1

General Information:
Name(s) found: PBA1 / YLR199C [SGD]
Description(s) found:
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  • pir||S48551 hypothetical protein YLR199c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|544512|gb|AAB67437.1| Ylr199cp [Saccharomyces cerevisiae] [NCBI NR]
  • - - Protein of unknown function localised to cytoplasm [mips]
  • Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasome precursors; similar to human PAC1 constituent of the PAC1-PAC2 complex involved in proteasome assembly [SGD]
  • YLR199C, Chr XII from 547855-548517, reverse complement [yeast_orfs2]
  • Chr XII from 547855-548517, reverse complement [yeastorf3.fasta]
  • >Q05778 (Q05778) Chromosome XII COSMID 8167 [4932.FASTACCERV.txt]
  • hypothetical protein YLR199c - yeast (Saccharomyces cerevisiae)gi|544512|gb|AAB67437.1| Ylr199cp [Saccharomyces cerevisiae] [nrdb_11152004_Chlamydomonas]
  • (Q05778) Ylr199cp [cerv4932.FASTAC]
  • Ylr199cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPLFPKNLL QLTSIGEIKT TLTVKSPSLP QSSGKHSWNY DENFPNEVDP DQKNDTADET  60
   61 VYGFSFPIYS FGKTLLFSME ENFISISPIF GNMISRSIIS QLAQFSPDII VIGTSDKIAS 120
  121 MKVMTENECT LQPPEFITGF IGSVLTQLIV GPSKGLKFKC LVAPSEGPNG FEKLSLSDMG 180
  181 SLVDLCGQWL GFEPSRYSEE CYRLWRCDSA AIGAQSGLYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle