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Protein Overview: YKR023W

General Information:
Name(s) found: YKR023W [SGD]
Description(s) found:
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  • gi|6322875|ref|NP_012948.1| Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; Ykr023wp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|549596|sp|P36119.1|YK03_YEAST RecName: Full=Uncharacterized protein YKR023W [NCBI NR]
  • pir||S38092 hypothetical protein YKR023w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|486447|emb|CAA82095.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized protein YKR023W OS=Saccharomyces cerevisiae GN=YKR023W PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function localised to cytoplasm [mips]
  • Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies [SGD]
  • YKR023W, Chr XI from 483057-484649 [yeast_orfs2]
  • Chr XI from 483057-484649 [yeastorf3.fasta]
  • (P36119) Hypothetical 60.8 kDa protein in YPT52-DBP7 intergenic region [4932.FASTACCERV.txt]
  • YKR023W SGDID:S0001731, Chr XI from 483062-484654, Uncharacterized ORF [yeastflysequest.fasta]
  • Ykr023wp [Saccharomyces cerevisiae]gi|486447|emb|CAA82095.1| unnamed protein product [Saccharomyces cerevisiae]gi|539241|pir||S38092 hypothetical protein YKR023w - yeast (Saccharomyces cerevisiae)gi|549596|sp|P36119|YK03_YEAST HYPOTHETICAL 60.8 KD PROT [nrdb_11152004_Chlamydomonas]
  • YKR023W SGDID:S000001731, Chr XI from 483062-484654, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and mitochondrion" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YKR023W SGDID:S000001731, Chr XI from 483062-484654, Uncharacterized ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and mitochondrion; Ykr023wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Hypothetical 60.8 kDa protein in YPT52-DBP7 intergenic region [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YKR023W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKR023W PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YKR023W SGDID:S000001731, Chr XI from 483419-485011, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [yeast-030211-contam.fasta]
  • YKR023W SGDID:S000001731, Chr XI from 483419-485011, Genome Release 64-2-1, Uncharacterized ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 530 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRKQAIDYA IKQVPQILPL EESDVKALCE QVLSTSSDDP EQIASKFLEF LGHEDLSFEF  60
   61 VMKFNELLNQ NDKKEEKKTK NVHLEHTAPT SWKNESKQPT NNYINKKGDE KPKKLKDEKK 120
  121 SSTTRPTVQP SNQSTQSNPI KEKKEHRSKG KLQSLQEIDE AIKMLELRDS GSSKNCNCQG 180
  181 TRHPVFDIAP NCLHCGKVVC VIEGLNKGKC GHCHEQLISD NERTQMVEIL NQEKNELNGS 240
  241 SSSLSNASNG ANVPKKKTKT YKITSGMGKN LFAEQDKLFD FIERKRERER KRNEVLKLQE 300
  301 EKEESEAKER QASEHDHKAE ENPELLAAQE RLDRLLYFQD TSAERTKIID NASDFDMNQE 360
  361 VGLWGSARER ALALKKQQRN LRKWEKVEKE RNGRREKYVV SMNIGSNGKV TMTEVPKDTE 420
  421 NVIAGSDDDI SDISDEEDIS DLKHIHALKS EINTTKSLEN LHLQSKAWDY ERDKKQFDRP 480
  481 TYVKKNSDTA QQNRKTEEKA HDMQAYDLKS RVQVDQNADA SVEQNILAVL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) CUE3 YKR023W

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #14 Mitotic Prep2-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YKR023W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] MSA 1.006977 View MSA. No confident structure predictions are available.
    2 View Details [119..345] MSA 3.008955 View MSA. No confident structure predictions are available.
    3 View Details [346..530] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.03363756201359 bayes_pls_golite062009
  • protein binding
    		•  0.12136520713995 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle