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Protein Overview: YJR129C

General Information:
Name(s) found: YJR129C [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function; predicted S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 339 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: S-adenosylmethionine-dependent methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEDLFYDRL HQRCPGKYLL EELETSKSND VLHASRFVCE MELVQKTNAY YCKTIVKMLL  60
   61 DHEWIFAKAF TIVNDGEDEI EIYDYLYEKY IKLLSTGKPD PMMKDVVRYR FDEDVKITIE 120
  121 ETPNLISAAS TTGFRTWEAA LYMGDFLIHK PLQELAPVQG QDDGKKKLNV LEVGAGTGIV 180
  181 SLVILQKYHE FVNKMYVTDG DSNLVETQLK RNFELNNEVR ENEPDIKLQR LWWGSDRVPE 240
  241 DIDLVVGADV TYDPTILPDL CECLAECLAL DRCKLCLLSA TIRSESTVQL FSQECNKLGL 300
  301 KCTIVTSTEY DANNEIRAMK ALQFKPLIAP IRIYKITKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YJR129C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 2.164993 View MSA. No confident structure predictions are available.
    2 View Details [122..339] PSI-BLAST 21.30103 Arginine methyltransferase, HMT1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methyltransferase activity
    		•  3.57681394097837 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  3.49392219433935 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  3.07428840534971 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  2.5924681776558 bayes_pls_golite062009
  • transferase activity
    		•  2.22303238506686 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  1.12859857407629 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.891400969900644 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  0.794703281700029 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  0.716476158062361 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.348134584790547 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.0854264678700428 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle