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Protein Overview: ECM27

General Information:
Name(s) found: ECM27 / YJR106W [SGD]
Description(s) found:
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  • gi|6322566|ref|NP_012640.1| Non-essential protein of unknown function; Ecm27p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1352908|sp|P47144.1|ECM27_YEAST RecName: Full=Protein ECM27; AltName: Full=Extracellular matrix protein 27 [NCBI NR]
  • pir||S57127 probable membrane protein YJR106w - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1015816|emb|CAA89636.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Protein ECM27 OS=Saccharomyces cerevisiae GN=ECM27 PE=1 SV=1 [Swiss-Prot]
  • (P47144) ECM27 protein [Swiss-Prot]
  • ECM27 Protein involved in cell surface biosynthesis and architecture [mips]
  • Non-essential protein of unknown function [SGD]
  • ECM27, Chr X from 624529-626706 [yeast_orfs2]
  • Chr X from 624529-626706 [yeastorf3.fasta]
  • Chr X from 624530-626707 [yeastorf4.fasta]
  • Chr X from 624531-626708 [yeastorf5.fasta]
  • (P47144) Hypothetical 80.7 kDa protein in SOD1-CPA2 intergenic region [4932.FASTACCERV.txt]
  • ECM27 SGDID:S0003867, Chr X from 624751-626928, Verified ORF [yeastflysequest.fasta]
  • Ecm27p [Saccharomyces cerevisiae]gi|1015816|emb|CAA89636.1| unnamed protein product [Saccharomyces cerevisiae]gi|1352908|sp|P47144|EC27_YEAST ECM27 proteingi|1078273|pir||S57127 probable membrane protein YJR106w - yeast (Saccharomyces cerevisiae) [nrdb_11152004_Chlamydomonas]
  • ECM27 SGDID:S000003867, Chr X from 624751-626928, Verified ORF, "Non-essential protein of unknown function" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • ECM27 SGDID:S000003867, Chr X from 624830-627007, Verified ORF, "Non-essential protein of unknown function" [yeast-contam.fasta]
  • ECM27 SGDID:S000003867, Chr X from 624827-627004, Verified ORF, "Non-essential protein of unknown function" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • ECM27 SGDID:S000003867, Chr X from 624826-627003, Verified ORF, "Non-essential protein of unknown function" [yeast-200209-contam.fasta]
  • Non-essential protein of unknown function; Ecm27p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Extracellular matrix protein 27 [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 725 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cellular cell wall organization [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWAINVAHP RLLYKDPKLS VTFIVPSLFH IIIAFVLLGI CASDFLCPNV AHISDPNSLR  60
   61 SNGSLVSKTA SHASHTGALM AVLLSWCNSS PDLFSNLMSW ATSTRETRST SVSLSIGEVL 120
  121 GACGIILCIV EGSIFIIMSR THIEISQIQK LSIMRDLLFS LAAMCVMSYV SLMNQVTVLN 180
  181 CLLMAFLYAF YLVVKLTFKL NHSAETPDET AADTSLREDS VSPFLDDSLM ASGLLPPIQP 240
  241 GFDISNSITH GIKPSLLSAM DFNSFLSMLE NSSLEEDDSR NEMAELNTLR SMTPGQHWSA 300
  301 SATVAGEATS AGRPFSEPTN AFTEYRDSER AINSSPAVFA PYRDNPDDEE SQEQVLLETT 360
  361 THGHFGAQEM RRFSKRSLGW IIKIFIPHLS NFSQKSISDA IFSIITVPFF IIFKLSCPQP 420
  421 PSDILSYDPT LNRYSLTTLP IILLFIQSIT APFLLCSILS VLLTYHLGYL VYLFPLILAM 480
  481 ALILLLTAFI TKVNLHNKFT LSLDSSNILQ EKLQKRKLLE RLNTSIQIIF LAIGIINIII 540
  541 WISLLANSLI EMMEIYQKIL GLSKAILGLT IFAWGNSVGD LISNISMCRL YKTQTHYQDR 600
  601 VRLATKFFMI SCASCLGGVM LNSMGGIGFS GLVSMLFIGA FNDNEWWFLR KVKLQETSQL 660
  661 DNTLNYKFIV SCVFIILQII LLLLFFGGPN NIKRRLTKEM KLVGISMCGL WALATLINIL 720
  721 LELFS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) CAF4 ECM27 ERG6 MTF1 PZF1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #22 Asynchronous Prep2-IMAC Phosphopeptide enrichment B1-2 Keck JM, et al. (2011)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] ab initio 8.0 No description for 1l9uD was found.
    2 View Details [131..422] ab initio 7.0 No description for 1itwA was found.
    3 View Details [423..596] ab initio 7.0 No description for 1itwA was found.
    4 View Details [597..725] MSA 2.049995 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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