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Protein Overview: YJL171C

General Information:
Name(s) found: YJL171C [SGD]
Description(s) found:
Found 20 descriptions.
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  • GPI-anchored cell wall protein of unknown function; induced in response to cell wall damaging agents and by mutations in genes involved in cell wall biogenesis; sequence similarity to YBR162C/TOS1, a covalently bound cell wall protein [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: fungal-type cell wall [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQSIVLSVC MFMLHTVAAS GPQSYQKLDF TNVGFTGSYV DVNKFKDITN NESCTCEVGD  60
   61 RVWFSGKNAP LADYLSVHFR GPLKLKQFAF YTSPGFTVNN SRSSSDWNRL AYYESSSKTA 120
  121 DNVTFLNHGG EASPCLGNAL SYASSNGTGS ASEATVLADG TLISSDQEYI IYSNVSCPKS 180
  181 GYDKGCGVYR SGIPAYYGYG GTTKMFLFEF EMPTETEKNS SSIGYYDLPA IWLLNDHIAR 240
  241 TSQYPTNANC SCWASGCGEY DIFEAMNGTE KNHLYSTFHT FQGIEDLGTG IQSYGYITRN 300
  301 TTGTMKGGVV FDSSGNVVSF ISDATPFNGT VSADTVNDLL AAIPENETYS SQLMSISATA 360
  361 PSTTSLSNGV RLTNMQNGVW YYILAIFTAF TQVVLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YJL171C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] deduced N/A No confident structure predictions are available.
    2 View Details [74..396] MSA 2.003922 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle