YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: VTC4

General Information:
Name(s) found: VTC4 / YJL012C [SGD]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • Vacuolar membrane polyphosphate polymerase; subunit of the vacuolar transporter chaperone (VTC) complex involved in synthesis and transfer of polyP to the vacuole; regulates membrane trafficking; role in non-autophagic vacuolar fusion [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to vacuolar membrane [IDALink to PubMed article]
    Biological Process: vacuole fusion, non-autophagic [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEHLSKS LIRQYSYYYI SYDDLKTELE DNLSKNNGQW TQELETDFLE SLEIELDKVY  60
   61 TFCKVKHSEV FRRVKEVQEQ VQHTVRLLDS NNPPTQLDFE ILEEELSDII ADVHDLAKFS 120
  121 RLNYTGFQKI IKKHDKKTGF ILKPVFQVRL DSKPFFKENY DELVVKISQL YDIARTSGRP 180
  181 IKGDSSAGGK QQNFVRQTTK YWVHPDNITE LKLIILKHLP VLVFNTNKEF EREDSAITSI 240
  241 YFDNENLDLY YGRLRKDEGA EAHRLRWYGG MSTDTIFVER KTHREDWTGE KSVKARFALK 300
  301 ERHVNDFLKG KYTVDQVFAK MRKEGKKPMN EIENLEALAS EIQYVMLKKK LRPVVRSFYN 360
  361 RTAFQLPGDA RVRISLDTEL TMVREDNFDG VDRTHKNWRR TDIGVDWPFK QLDDKDICRF 420
  421 PYAVLEVKLQ TQLGQEPPEW VRELVGSHLV EPVPKFSKFI HGVATLLNDK VDSIPFWLPQ 480
  481 MDVDIRKPPL PTNIEITRPG RSDNEDNDFD EDDEDDAALV AAMTNAPGNS LDIEESVGYG 540
  541 ATSAPTSNTN HVVESANAAY YQRKIRNAEN PISKKYYEIV AFFDHYFNGD QISKIPKGTT 600
  601 FDTQIRAPPE RRYVCQFVWN QKFTLPLKEP TCLGCPSRYC WAVSPLLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run TOR2 No Comments Reinke A, et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] Pfam 49.026872 SPX domain No confident structure predictions are available.
    2 View Details [195..498] MSA 2.029935 View MSA. No confident structure predictions are available.
    3 View Details [499..648] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle