| Protein: | VTC4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 648 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VTC4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..558] | [1..546] |
|
|
0.0 | [1..505] | [1..528] |
|
|
0.0 | [1..505] | [1..528] |
|
|
0.0 | [1..512] | [1..584] |
|
|
0.0 | [1..497] | [1..469] |
|
|
0.0 | [231..512] | [36..343] |
|
|
1.0E-65 | [180..459] | [11..258] |
|
Region A: Residues: [1-194] |
1 11 21 31 41 51
| | | | | |
1 MKFGEHLSKS LIRQYSYYYI SYDDLKTELE DNLSKNNGQW TQELETDFLE SLEIELDKVY 60
61 TFCKVKHSEV FRRVKEVQEQ VQHTVRLLDS NNPPTQLDFE ILEEELSDII ADVHDLAKFS 120
121 RLNYTGFQKI IKKHDKKTGF ILKPVFQVRL DSKPFFKENY DELVVKISQL YDIARTSGRP 180
181 IKGDSSAGGK QQNF
|
| Detection Method: |  |
| Confidence: | 49.026872 |
| Match: | PF03105 |
| Description: | SPX domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [195-498] |
1 11 21 31 41 51
| | | | | |
1 VRQTTKYWVH PDNITELKLI ILKHLPVLVF NTNKEFERED SAITSIYFDN ENLDLYYGRL 60
61 RKDEGAEAHR LRWYGGMSTD TIFVERKTHR EDWTGEKSVK ARFALKERHV NDFLKGKYTV 120
121 DQVFAKMRKE GKKPMNEIEN LEALASEIQY VMLKKKLRPV VRSFYNRTAF QLPGDARVRI 180
181 SLDTELTMVR EDNFDGVDRT HKNWRRTDIG VDWPFKQLDD KDICRFPYAV LEVKLQTQLG 240
241 QEPPEWVREL VGSHLVEPVP KFSKFIHGVA TLLNDKVDSI PFWLPQMDVD IRKPPLPTNI 300
301 EITR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [499-648] |
1 11 21 31 41 51
| | | | | |
1 PGRSDNEDND FDEDDEDDAA LVAAMTNAPG NSLDIEESVG YGATSAPTSN TNHVVESANA 60
61 AYYQRKIRNA ENPISKKYYE IVAFFDHYFN GDQISKIPKG TTFDTQIRAP PERRYVCQFV 120
121 WNQKFTLPLK EPTCLGCPSR YCWAVSPLLY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
