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Protein Overview: FAF1

General Information:
Name(s) found: FAF1 / YIL019W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Protein required for pre-rRNA processing and 40S ribosomal subunit assembly [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    nucleolus [IDALink to PubMed articleLink to PubMed article]
    Biological Process: maturation of SSU-rRNA [IMPLink to PubMed articleLink to PubMed article]
    ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDDDDYIK QMELQRKAFE SQFGSLESMG FEDKTKNIRT EVDTRDSSGD EIDNSDHGSD  60
   61 FKDGTIESSN SSDEDSGNET AEENNQDSKP KTQPKVIRFN GPSDVYVPPS KKTQKLLRSG 120
  121 KTLTQINKKL ESTEAKEEKE DETLEAENLQ NDLELQQFLR ESHLLSAFNN GGSGSTNSGV 180
  181 SLTLQSMGGG NDDGIVYQDD QVIGKARSRT LEMRLNRLSR VNGHQDKINK LEKVPMHIRR 240
  241 GMIDKHVKRI KKYEQEAAEG GIVLSKVKKG QFRKIESTYK KDIERRIGGS IKARDKEKAT 300
  301 KRERGLKISS VGRSTRNGLI VSKRDIARIS GGERSGKFNG KKKSRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PSE1 FAF1 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data FAF1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..346] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle